Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105378853 (uncharacterized LOC105378853)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105378853
Atlas_Id 78225
Location 1p22.2  [Link to chromosome band 1p22]
Location_base_pair Starts at 90782984 and ends at 90851638 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105378853  105378853  uncharacterized LOC105378853
Aliases
GeneCards (Weizmann)LOC105378853
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:90782984-90851638 [Contig_View]  LOC105378853 [Vega]
TCGA cBioPortalLOC105378853
AceView (NCBI)LOC105378853
Genatlas (Paris)LOC105378853
WikiGenes105378853
SOURCE (Princeton)LOC105378853
Genetics Home Reference (NIH)LOC105378853
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105378853  -     chr1:90782984-90851638 -  1p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105378853  -     1p22.2   [Description]    (hg19-Feb_2009)
EnsemblLOC105378853 - 1p22.2 [CytoView hg19]  LOC105378853 - 1p22.2 [CytoView hg38]
Mapping of homologs : NCBILOC105378853 [Mapview hg19]  LOC105378853 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BJ993392 BJ993393 BX103107 CB164346
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105378853
Cluster EST : UnigeneHs.546492 [ NCBI ]
CGAP (NCI)Hs.546492
Gene ExpressionLOC105378853 [ NCBI-GEO ]   LOC105378853 [ EBI - ARRAY_EXPRESS ]   LOC105378853 [ SEEK ]   LOC105378853 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105378853 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378853
GTEX Portal (Tissue expression)LOC105378853
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105378853
DMDM Disease mutations105378853
Blocks (Seattle)LOC105378853
Protein Interaction databases
BioGRIDLOC105378853
STRING (EMBL)LOC105378853
ZODIACLOC105378853
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105378853
BioCentury BCIQLOC105378853
ClinGenLOC105378853
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378853
Clinical trialLOC105378853
Miscellaneous
canSAR (ICR)LOC105378853 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105378853
EVEXLOC105378853
GoPubMedLOC105378853
iHOPLOC105378853
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:51:50 CET 2017

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