Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC105378997 (basic salivary proline-rich protein 2)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 105378997
Atlas_Id 76964
Location 5q12.1  [Link to chromosome band 5q12]
Location_base_pair Starts at 61624401 and ends at 61631404 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC105378997  105378997  basic salivary proline-rich protein 2
Aliases
GeneCards (Weizmann)LOC105378997
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:61624401-61631404 [Contig_View]  LOC105378997 [Vega]
TCGA cBioPortalLOC105378997
AceView (NCBI)LOC105378997
Genatlas (Paris)LOC105378997
WikiGenes105378997
SOURCE (Princeton)LOC105378997
Genetics Home Reference (NIH)LOC105378997
Genomic and cartography
GoldenPath hg38 (UCSC)LOC105378997  -     chr5:61624401-61631404 -  5q12.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC105378997  -     5q12.1   [Description]    (hg19-Feb_2009)
EnsemblLOC105378997 - 5q12.1 [CytoView hg19]  LOC105378997 - 5q12.1 [CytoView hg38]
Mapping of homologs : NCBILOC105378997 [Mapview hg19]  LOC105378997 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC032909 BC032910
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC105378997
Cluster EST : UnigeneHs.382230 [ NCBI ]
CGAP (NCI)Hs.382230
Gene ExpressionLOC105378997 [ NCBI-GEO ]   LOC105378997 [ EBI - ARRAY_EXPRESS ]   LOC105378997 [ SEEK ]   LOC105378997 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC105378997 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)105378997
GTEX Portal (Tissue expression)LOC105378997
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC105378997
DMDM Disease mutations105378997
Blocks (Seattle)LOC105378997
Protein Interaction databases
BioGRIDLOC105378997
STRING (EMBL)LOC105378997
ZODIACLOC105378997
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease105378997
BioCentury BCIQLOC105378997
ClinGenLOC105378997
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD105378997
Clinical trialLOC105378997
Miscellaneous
canSAR (ICR)LOC105378997 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC105378997
EVEXLOC105378997
GoPubMedLOC105378997
iHOPLOC105378997
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:24:08 CEST 2017

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