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LOC107133515 (SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 107133515
Atlas_Id 78238
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 30576465 and ends at 30637466 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC107133515  107133515  SMURF2P1-LRRC37BP1 readthrough transcribed pseudogene
Aliases
GeneCards (Weizmann)LOC107133515
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:30576465-30637466 [Contig_View]  LOC107133515 [Vega]
TCGA cBioPortalLOC107133515
AceView (NCBI)LOC107133515
Genatlas (Paris)LOC107133515
WikiGenes107133515
SOURCE (Princeton)LOC107133515
Genetics Home Reference (NIH)LOC107133515
Genomic and cartography
GoldenPath hg38 (UCSC)LOC107133515  -     chr17:30576465-30637466 +  17q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC107133515  -     17q11.2   [Description]    (hg19-Feb_2009)
EnsemblLOC107133515 - 17q11.2 [CytoView hg19]  LOC107133515 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBILOC107133515 [Mapview hg19]  LOC107133515 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI420621 AK075282 AK124759 BC042455 BC118647
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC107133515
Cluster EST : UnigeneHs.568209 [ NCBI ]
CGAP (NCI)Hs.568209
Gene ExpressionLOC107133515 [ NCBI-GEO ]   LOC107133515 [ EBI - ARRAY_EXPRESS ]   LOC107133515 [ SEEK ]   LOC107133515 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC107133515 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)107133515
GTEX Portal (Tissue expression)LOC107133515
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC107133515
DMDM Disease mutations107133515
Blocks (Seattle)LOC107133515
Protein Interaction databases
BioGRIDLOC107133515
STRING (EMBL)LOC107133515
ZODIACLOC107133515
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease107133515
BioCentury BCIQLOC107133515
ClinGenLOC107133515
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD107133515
Clinical trialLOC107133515
Miscellaneous
canSAR (ICR)LOC107133515 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC107133515
EVEXLOC107133515
GoPubMedLOC107133515
iHOPLOC107133515
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:08:36 CET 2017

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