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LOC108783645 (HFE antisense RNA)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 108783645
Atlas_Id 78743
Location 6p22.2  [Link to chromosome band 6p22]
Location_base_pair Starts at 26086290 and ends at 26091034 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC108783645    HFE antisense RNA
Aliases
GeneCards (Weizmann)LOC108783645
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:26086290-26091034 [Contig_View]  LOC108783645 [Vega]
TCGA cBioPortalLOC108783645
AceView (NCBI)LOC108783645
Genatlas (Paris)LOC108783645
SOURCE (Princeton)LOC108783645
Genetics Home Reference (NIH)LOC108783645
Genomic and cartography
GoldenPath hg38 (UCSC)LOC108783645  -     chr6:26086290-26091034 -  6p22.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC108783645  -     6p22.2   [Description]    (hg19-Feb_2009)
GoldenPathLOC108783645 - 6p22.2 [CytoView hg19]  LOC108783645 - 6p22.2 [CytoView hg38]
genome Data Viewer NCBILOC108783645 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK123489
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC108783645
Gene ExpressionLOC108783645 [ NCBI-GEO ]   LOC108783645 [ EBI - ARRAY_EXPRESS ]   LOC108783645 [ SEEK ]   LOC108783645 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC108783645 [ Firebrowse - Broad ]
GenevisibleExpression of LOC108783645 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)108783645
GTEX Portal (Tissue expression)LOC108783645
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC108783645
Blocks (Seattle)LOC108783645
Protein Interaction databases
BioGRIDLOC108783645
STRING (EMBL)LOC108783645
ZODIACLOC108783645
Ontologies - Pathways
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC108783645
EVEXLOC108783645
GoPubMedLOC108783645
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:10:44 CET 2020

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