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LOC112577516 (carbohydrate-binding protein AQN-1-like)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 112577516
Atlas_Id 80271
Location 10q26.13  [Link to chromosome band 10q26]
Location_base_pair Starts at 122672850 and ends at 122679048 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC112577516    carbohydrate-binding protein AQN-1-like
Aliases
GeneCards (Weizmann)LOC112577516
Ensembl hg19 (Hinxton)ENSG00000286135 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000286135 [Gene_View]  ENSG00000286135 [Sequence]  chr10:122672850-122679048 [Contig_View]  LOC112577516 [Vega]
ICGC DataPortalENSG00000286135
TCGA cBioPortalLOC112577516
AceView (NCBI)LOC112577516
Genatlas (Paris)LOC112577516
SOURCE (Princeton)LOC112577516
Genetics Home Reference (NIH)LOC112577516
Genomic and cartography
GoldenPath hg38 (UCSC)LOC112577516  -     chr10:122672850-122679048 +  10q26.13   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC112577516  -     10q26.13   [Description]    (hg19-Feb_2009)
GoldenPathLOC112577516 - 10q26.13 [CytoView hg19]  LOC112577516 - 10q26.13 [CytoView hg38]
ImmunoBaseENSG00000286135
Genome Data Viewer NCBILOC112577516 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)NM_001364461
Consensus coding sequences : CCDS (NCBI)LOC112577516
Gene ExpressionLOC112577516 [ NCBI-GEO ]   LOC112577516 [ EBI - ARRAY_EXPRESS ]   LOC112577516 [ SEEK ]   LOC112577516 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC112577516 [ Firebrowse - Broad ]
GenevisibleExpression of LOC112577516 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)112577516
GTEX Portal (Tissue expression)LOC112577516
Human Protein AtlasENSG00000286135-LOC112577516 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC112577516
Human Protein Atlas [tissue]ENSG00000286135-LOC112577516 [tissue]
Protein Interaction databases
BioGRIDLOC112577516
STRING (EMBL)LOC112577516
ZODIACLOC112577516
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLOC112577516
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:05:08 CEST 2021

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