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LOC152225 (uncharacterized LOC152225)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 152225
Atlas_Id 67821
Location 3q12.3  [Link to chromosome band 3q12]
Location_base_pair Starts at 101659703 and ends at 101716770 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC152225  152225  uncharacterized LOC152225
Aliases
GeneCards (Weizmann)LOC152225
Ensembl hg19 (Hinxton)ENSG00000214407 [Gene_View]  chr3:101659703-101716770 [Contig_View]  LOC152225 [Vega]
Ensembl hg38 (Hinxton)ENSG00000214407 [Gene_View]  chr3:101659703-101716770 [Contig_View]  LOC152225 [Vega]
ICGC DataPortalENSG00000214407
TCGA cBioPortalLOC152225
AceView (NCBI)LOC152225
Genatlas (Paris)LOC152225
WikiGenes152225
SOURCE (Princeton)LOC152225
Genetics Home Reference (NIH)LOC152225
Genomic and cartography
GoldenPath hg19 (UCSC)LOC152225  -     chr3:101659703-101716770 +  3q12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC152225  -     3q12.3   [Description]    (hg38-Dec_2013)
EnsemblLOC152225 - 3q12.3 [CytoView hg19]  LOC152225 - 3q12.3 [CytoView hg38]
Mapping of homologs : NCBILOC152225 [Mapview hg19]  LOC152225 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK090588 BC113576 BC113578 BC143890 BG249468
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000003 NC_018914 NT_005612 NW_004929311
Consensus coding sequences : CCDS (NCBI)LOC152225
Cluster EST : UnigeneHs.376768 [ NCBI ]
CGAP (NCI)Hs.376768
Alternative Splicing GalleryENSG00000214407
Gene ExpressionLOC152225 [ NCBI-GEO ]   LOC152225 [ EBI - ARRAY_EXPRESS ]   LOC152225 [ SEEK ]   LOC152225 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC152225 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)152225
GTEX Portal (Tissue expression)LOC152225
Protein : pattern, domain, 3D structure
UniProt/SwissProtQ0VG73   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtQ0VG73  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProQ0VG73
Splice isoforms : SwissVarQ0VG73
PhosPhoSitePlusQ0VG73
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC152225
DMDM Disease mutations152225
Blocks (Seattle)LOC152225
SuperfamilyQ0VG73
Human Protein AtlasENSG00000214407
Peptide AtlasQ0VG73
IPIIPI00784700   
Protein Interaction databases
DIP (DOE-UCLA)Q0VG73
IntAct (EBI)Q0VG73
FunCoupENSG00000214407
BioGRIDLOC152225
STRING (EMBL)LOC152225
ZODIACLOC152225
Ontologies - Pathways
QuickGOQ0VG73
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLOC152225
Atlas of Cancer Signalling NetworkLOC152225
Wikipedia pathwaysLOC152225
Orthology - Evolution
OrthoDB152225
GeneTree (enSembl)ENSG00000214407
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENQ0VG73
HOGENOMQ0VG73
Homologs : HomoloGeneLOC152225
Homology/Alignments : Family Browser (UCSC)LOC152225
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLOC152225 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LOC152225
dbVarLOC152225
ClinVarLOC152225
1000_GenomesLOC152225 
Exome Variant ServerLOC152225
ExAC (Exome Aggregation Consortium)LOC152225 (select the gene name)
Genetic variants : HAPMAP152225
Genomic Variants (DGV)LOC152225 [DGVbeta]
DECIPHER (Syndromes)3:101659703-101716770  ENSG00000214407
CONAN: Copy Number AnalysisLOC152225 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch LOC152225
DgiDB (Drug Gene Interaction Database)LOC152225
DoCM (Curated mutations)LOC152225 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LOC152225 (select a term)
intoGenLOC152225
Cancer3DLOC152225(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLOC152225
Genetic Testing Registry LOC152225
NextProtQ0VG73 [Medical]
TSGene152225
GENETestsLOC152225
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease152225
BioCentury BCIQLOC152225
ClinGenLOC152225
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD152225
Clinical trialLOC152225
Miscellaneous
canSAR (ICR)LOC152225 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC152225
EVEXLOC152225
GoPubMedLOC152225
iHOPLOC152225
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Tue Mar 14 12:24:14 CET 2017

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