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LOC171391 (uncharacterized LOC171391)

Identity

Other aliasNS3BP
HGNC (Hugo) -
LocusID (NCBI) 171391
Atlas_Id 67844
Location 11p15.5  [Link to chromosome band 11p15]
Location_base_pair Starts at 777578 and ends at 784284 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC171391  171391  uncharacterized LOC171391
AliasesNS3BP
GeneCards (Weizmann)LOC171391
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:777578-784284 [Contig_View]  LOC171391 [Vega]
TCGA cBioPortalLOC171391
AceView (NCBI)LOC171391
Genatlas (Paris)LOC171391
WikiGenes171391
SOURCE (Princeton)LOC171391
Genetics Home Reference (NIH)LOC171391
Genomic and cartography
GoldenPath hg38 (UCSC)LOC171391  -     chr11:777578-784284 +  11p15.5   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC171391  -     11p15.5   [Description]    (hg19-Feb_2009)
EnsemblLOC171391 - 11p15.5 [CytoView hg19]  LOC171391 - 11p15.5 [CytoView hg38]
Mapping of homologs : NCBILOC171391 [Mapview hg19]  LOC171391 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AF435951 AK314117 BF529437 BU156985 DB473307
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC171391
Cluster EST : UnigeneHs.711081 [ NCBI ]
CGAP (NCI)Hs.711081
Gene ExpressionLOC171391 [ NCBI-GEO ]   LOC171391 [ EBI - ARRAY_EXPRESS ]   LOC171391 [ SEEK ]   LOC171391 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC171391 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)171391
GTEX Portal (Tissue expression)LOC171391
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC171391
DMDM Disease mutations171391
Blocks (Seattle)LOC171391
IPIIPI00152528   
Protein Interaction databases
BioGRIDLOC171391
STRING (EMBL)LOC171391
ZODIACLOC171391
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease171391
BioCentury BCIQLOC171391
ClinGenLOC171391
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD171391
Clinical trialLOC171391
Miscellaneous
canSAR (ICR)LOC171391 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC171391
EVEXLOC171391
GoPubMedLOC171391
iHOPLOC171391
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:08:57 CET 2017

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