Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC220729 (succinate dehydrogenase complex flavoprotein subunit A pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 220729
Atlas_Id 67854
Location 3q29  [Link to chromosome band 3q29]
Location_base_pair Starts at 197614027 and ends at 197627881 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC220729  220729  succinate dehydrogenase complex flavoprotein subunit A pseudogene
Aliases
GeneCards (Weizmann)LOC220729
Ensembl hg19 (Hinxton)ENSG00000214135 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000214135 [Gene_View]  chr3:197614027-197627881 [Contig_View]  LOC220729 [Vega]
ICGC DataPortalENSG00000214135
TCGA cBioPortalLOC220729
AceView (NCBI)LOC220729
Genatlas (Paris)LOC220729
WikiGenes220729
SOURCE (Princeton)LOC220729
Genetics Home Reference (NIH)LOC220729
Genomic and cartography
GoldenPath hg38 (UCSC)LOC220729  -     chr3:197614027-197627881 -  3q29   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC220729  -     3q29   [Description]    (hg19-Feb_2009)
EnsemblLOC220729 - 3q29 [CytoView hg19]  LOC220729 - 3q29 [CytoView hg38]
Mapping of homologs : NCBILOC220729 [Mapview hg19]  LOC220729 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK299863 AK309924 AK311713 BC067856 BC080518
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC220729
Cluster EST : UnigeneHs.478854 [ NCBI ]
CGAP (NCI)Hs.478854
Alternative Splicing GalleryENSG00000214135
Gene ExpressionLOC220729 [ NCBI-GEO ]   LOC220729 [ EBI - ARRAY_EXPRESS ]   LOC220729 [ SEEK ]   LOC220729 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC220729 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)220729
GTEX Portal (Tissue expression)LOC220729
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC220729
DMDM Disease mutations220729
Blocks (Seattle)LOC220729
Human Protein AtlasENSG00000214135
IPIIPI00895897   
Protein Interaction databases
FunCoupENSG00000214135
BioGRIDLOC220729
STRING (EMBL)LOC220729
ZODIACLOC220729
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease220729
BioCentury BCIQLOC220729
ClinGenLOC220729
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD220729
Clinical trialLOC220729
Miscellaneous
canSAR (ICR)LOC220729 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC220729
EVEXLOC220729
GoPubMedLOC220729
iHOPLOC220729
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:21:42 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.