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LOC283788 (FSHD region gene 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 283788
Atlas_Id 67913
Location Un_GL000219v1  [Link to chromosome band 000219]
Location_base_pair Starts at 57414 and ends at 99642 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC283788  283788  FSHD region gene 1 pseudogene
Aliases
GeneCards (Weizmann)LOC283788
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrUn_GL000219v1:57414-99642 [Contig_View]  LOC283788 [Vega]
TCGA cBioPortalLOC283788
AceView (NCBI)LOC283788
Genatlas (Paris)LOC283788
WikiGenes283788
SOURCE (Princeton)LOC283788
Genetics Home Reference (NIH)LOC283788
Genomic and cartography
GoldenPath hg38 (UCSC)LOC283788  -     chrUn_GL000219v1:57414-99642 -  Un_GL000219v1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC283788  -     Un_GL000219v1   [Description]    (hg19-Feb_2009)
EnsemblLOC283788 - Un_GL000219v1 [CytoView hg19]  LOC283788 - Un_GL000219v1 [CytoView hg38]
Mapping of homologs : NCBILOC283788 [Mapview hg19]  LOC283788 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK055615 AK074568 AK091662 AK127309 AK131396
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NT_167213
Consensus coding sequences : CCDS (NCBI)LOC283788
Cluster EST : UnigeneHs.729163 [ NCBI ]
CGAP (NCI)Hs.729163
Gene ExpressionLOC283788 [ NCBI-GEO ]   LOC283788 [ EBI - ARRAY_EXPRESS ]   LOC283788 [ SEEK ]   LOC283788 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC283788 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)283788
GTEX Portal (Tissue expression)LOC283788
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC283788
DMDM Disease mutations283788
Blocks (Seattle)LOC283788
IPIIPI00807669   IPI00941871   
Protein Interaction databases
BioGRIDLOC283788
STRING (EMBL)LOC283788
ZODIACLOC283788
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease283788
BioCentury BCIQLOC283788
ClinGenLOC283788
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD283788
Clinical trialLOC283788
Miscellaneous
canSAR (ICR)LOC283788 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC283788
EVEXLOC283788
GoPubMedLOC283788
iHOPLOC283788
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:56:04 CET 2017

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