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LOC338620 (uncharacterized LOC338620)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 338620
Atlas_Id 68030
Location 10p11.22  [Link to chromosome band 10p11]
Location_base_pair Starts at 32887261 and ends at 32888480 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC338620  338620  uncharacterized LOC338620
Aliases
GeneCards (Weizmann)LOC338620
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:32887261-32888480 [Contig_View]  LOC338620 [Vega]
TCGA cBioPortalLOC338620
AceView (NCBI)LOC338620
Genatlas (Paris)LOC338620
WikiGenes338620
SOURCE (Princeton)LOC338620
Genetics Home Reference (NIH)LOC338620
Genomic and cartography
GoldenPath hg38 (UCSC)LOC338620  -     chr10:32887261-32888480 -  10p11.22   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC338620  -     10p11.22   [Description]    (hg19-Feb_2009)
EnsemblLOC338620 - 10p11.22 [CytoView hg19]  LOC338620 - 10p11.22 [CytoView hg38]
Mapping of homologs : NCBILOC338620 [Mapview hg19]  LOC338620 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043009
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC338620
Cluster EST : UnigeneHs.660499 [ NCBI ]
CGAP (NCI)Hs.660499
Gene ExpressionLOC338620 [ NCBI-GEO ]   LOC338620 [ EBI - ARRAY_EXPRESS ]   LOC338620 [ SEEK ]   LOC338620 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC338620 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)338620
GTEX Portal (Tissue expression)LOC338620
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC338620
DMDM Disease mutations338620
Blocks (Seattle)LOC338620
IPIIPI00929184   
Protein Interaction databases
BioGRIDLOC338620
STRING (EMBL)LOC338620
ZODIACLOC338620
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease338620
BioCentury BCIQLOC338620
ClinGenLOC338620
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD338620
Clinical trialLOC338620
Miscellaneous
canSAR (ICR)LOC338620 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC338620
EVEXLOC338620
GoPubMedLOC338620
iHOPLOC338620
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:56:28 CET 2017

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