Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC339352 (cytosolic thiouridylase subunit 1 homolog (S. pombe) pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 339352
Atlas_Id 76541
Location 19q13.41  [Link to chromosome band 19q13]
Location_base_pair Starts at 52102542 and ends at 52103723 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC339352  339352  cytosolic thiouridylase subunit 1 homolog (S. pombe) pseudogene
Aliases
GeneCards (Weizmann)LOC339352
Ensembl hg19 (Hinxton) [Gene_View]  chr19:52102542-52103723 [Contig_View]  LOC339352 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr19:52102542-52103723 [Contig_View]  LOC339352 [Vega]
TCGA cBioPortalLOC339352
AceView (NCBI)LOC339352
Genatlas (Paris)LOC339352
WikiGenes339352
SOURCE (Princeton)LOC339352
Genetics Home Reference (NIH)LOC339352
Genomic and cartography
GoldenPath hg19 (UCSC)LOC339352  -     chr19:52102542-52103723 +  19q13.41   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC339352  -     19q13.41   [Description]    (hg38-Dec_2013)
EnsemblLOC339352 - 19q13.41 [CytoView hg19]  LOC339352 - 19q13.41 [CytoView hg38]
Mapping of homologs : NCBILOC339352 [Mapview hg19]  LOC339352 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC034798 HG510979
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000019 NC_018930 NG_030306 NT_011109 NW_004929415
Consensus coding sequences : CCDS (NCBI)LOC339352
Cluster EST : UnigeneHs.711808 [ NCBI ]
CGAP (NCI)Hs.711808
Gene ExpressionLOC339352 [ NCBI-GEO ]   LOC339352 [ EBI - ARRAY_EXPRESS ]   LOC339352 [ SEEK ]   LOC339352 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC339352 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339352
GTEX Portal (Tissue expression)LOC339352
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC339352
DMDM Disease mutations339352
Blocks (Seattle)LOC339352
IPIIPI00643550   
Protein Interaction databases
BioGRIDLOC339352
STRING (EMBL)LOC339352
ZODIACLOC339352
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease339352
BioCentury BCIQLOC339352
ClinGenLOC339352
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339352
Clinical trialLOC339352
Miscellaneous
canSAR (ICR)LOC339352 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC339352
EVEXLOC339352
GoPubMedLOC339352
iHOPLOC339352
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:24:57 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.