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LOC339529 (uncharacterized LOC339529)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 339529
Atlas_Id 68041
Location 1q44  [Link to chromosome band 1q44]
Location_base_pair Starts at 243917402 and ends at 244047318 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC339529  339529  uncharacterized LOC339529
Aliases
GeneCards (Weizmann)LOC339529
Ensembl hg19 (Hinxton)ENSG00000226828 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000226828 [Gene_View]  chr1:243917402-244047318 [Contig_View]  LOC339529 [Vega]
ICGC DataPortalENSG00000226828
TCGA cBioPortalLOC339529
AceView (NCBI)LOC339529
Genatlas (Paris)LOC339529
WikiGenes339529
SOURCE (Princeton)LOC339529
Genetics Home Reference (NIH)LOC339529
Genomic and cartography
GoldenPath hg38 (UCSC)LOC339529  -     chr1:243917402-244047318 +  1q44   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC339529  -     1q44   [Description]    (hg19-Feb_2009)
EnsemblLOC339529 - 1q44 [CytoView hg19]  LOC339529 - 1q44 [CytoView hg38]
Mapping of homologs : NCBILOC339529 [Mapview hg19]  LOC339529 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC046644
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC339529
Cluster EST : UnigeneHs.209374 [ NCBI ]
CGAP (NCI)Hs.209374
Alternative Splicing GalleryENSG00000226828
Gene ExpressionLOC339529 [ NCBI-GEO ]   LOC339529 [ EBI - ARRAY_EXPRESS ]   LOC339529 [ SEEK ]   LOC339529 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC339529 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)339529
GTEX Portal (Tissue expression)LOC339529
Human Protein AtlasENSG00000226828-LOC339529 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC339529
DMDM Disease mutations339529
Blocks (Seattle)LOC339529
Human Protein Atlas [tissue]ENSG00000226828-LOC339529 [tissue]
IPIIPI00975611   
Protein Interaction databases
FunCoupENSG00000226828
BioGRIDLOC339529
STRING (EMBL)LOC339529
ZODIACLOC339529
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease339529
BioCentury BCIQLOC339529
ClinGenLOC339529
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD339529
Clinical trialLOC339529
Miscellaneous
canSAR (ICR)LOC339529 (select the gene name)
Probes
Litterature
PubMed3 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC339529
EVEXLOC339529
GoPubMedLOC339529
iHOPLOC339529
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:56:30 CET 2017

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