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LOC340090 (uncharacterized LOC340090)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 340090
Atlas_Id 68057
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 73195290 and ends at 73201961 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC340090  340090  uncharacterized LOC340090
Aliases
GeneCards (Weizmann)LOC340090
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr5:73195290-73201961 [Contig_View]  LOC340090 [Vega]
TCGA cBioPortalLOC340090
AceView (NCBI)LOC340090
Genatlas (Paris)LOC340090
WikiGenes340090
SOURCE (Princeton)LOC340090
Genetics Home Reference (NIH)LOC340090
Genomic and cartography
GoldenPath hg38 (UCSC)LOC340090  -     chr5:73195290-73201961 -  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC340090  -     5q13.2   [Description]    (hg19-Feb_2009)
EnsemblLOC340090 - 5q13.2 [CytoView hg19]  LOC340090 - 5q13.2 [CytoView hg38]
Mapping of homologs : NCBILOC340090 [Mapview hg19]  LOC340090 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC043557
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC340090
Cluster EST : UnigeneHs.434311 [ NCBI ]
CGAP (NCI)Hs.434311
Gene ExpressionLOC340090 [ NCBI-GEO ]   LOC340090 [ EBI - ARRAY_EXPRESS ]   LOC340090 [ SEEK ]   LOC340090 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC340090 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)340090
GTEX Portal (Tissue expression)LOC340090
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC340090
DMDM Disease mutations340090
Blocks (Seattle)LOC340090
Protein Interaction databases
BioGRIDLOC340090
STRING (EMBL)LOC340090
ZODIACLOC340090
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease340090
BioCentury BCIQLOC340090
ClinGenLOC340090
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD340090
Clinical trialLOC340090
Miscellaneous
canSAR (ICR)LOC340090 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC340090
EVEXLOC340090
GoPubMedLOC340090
iHOPLOC340090
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:09:39 CET 2017

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