Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC340090 (uncharacterized LOC340090)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 340090
Atlas_Id 68057
Location 5q13.2  [Link to chromosome band 5q13]
Location_base_pair Starts at 73195290 and ends at 73201961 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC340090    uncharacterized LOC340090
Aliases
GeneCards (Weizmann)LOC340090
Ensembl hg19 (Hinxton)ENSG00000287090 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000287090 [Gene_View]  ENSG00000287090 [Sequence]  chr5:73195290-73201961 [Contig_View]  LOC340090 [Vega]
ICGC DataPortalENSG00000287090
TCGA cBioPortalLOC340090
AceView (NCBI)LOC340090
Genatlas (Paris)LOC340090
SOURCE (Princeton)LOC340090
Genetics Home Reference (NIH)LOC340090
Genomic and cartography
GoldenPath hg38 (UCSC)LOC340090  -     chr5:73195290-73201961 -  5q13.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC340090  -     5q13.2   [Description]    (hg19-Feb_2009)
GoldenPathLOC340090 - 5q13.2 [CytoView hg19]  LOC340090 - 5q13.2 [CytoView hg38]
ImmunoBaseENSG00000287090
Genome Data Viewer NCBILOC340090 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BC043557
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC340090
Gene ExpressionLOC340090 [ NCBI-GEO ]   LOC340090 [ EBI - ARRAY_EXPRESS ]   LOC340090 [ SEEK ]   LOC340090 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC340090 [ Firebrowse - Broad ]
GenevisibleExpression of LOC340090 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)340090
GTEX Portal (Tissue expression)LOC340090
Human Protein AtlasENSG00000287090-LOC340090 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC340090
Human Protein Atlas [tissue]ENSG00000287090-LOC340090 [tissue]
Protein Interaction databases
BioGRIDLOC340090
STRING (EMBL)LOC340090
ZODIACLOC340090
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLOC340090
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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indexed on : Sun Jan 16 19:08:37 CET 2022

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