Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC375196 (uncharacterized LOC375196)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 375196
Atlas_Id 68072
Location 2p22.1  [Link to chromosome band 2p22]
Location_base_pair Starts at 38959288 and ends at 38960344 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC375196  375196  uncharacterized LOC375196
Aliases
GeneCards (Weizmann)LOC375196
Ensembl hg19 (Hinxton)ENSG00000269210 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000269210 [Gene_View]  chr2:38959288-38960344 [Contig_View]  LOC375196 [Vega]
ICGC DataPortalENSG00000269210
TCGA cBioPortalLOC375196
AceView (NCBI)LOC375196
Genatlas (Paris)LOC375196
WikiGenes375196
SOURCE (Princeton)LOC375196
Genetics Home Reference (NIH)LOC375196
Genomic and cartography
GoldenPath hg38 (UCSC)LOC375196  -     chr2:38959288-38960344 -  2p22.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC375196  -     2p22.1   [Description]    (hg19-Feb_2009)
EnsemblLOC375196 - 2p22.1 [CytoView hg19]  LOC375196 - 2p22.1 [CytoView hg38]
Mapping of homologs : NCBILOC375196 [Mapview hg19]  LOC375196 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC030087
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC375196
Cluster EST : UnigeneHs.659035 [ NCBI ]
CGAP (NCI)Hs.659035
Alternative Splicing GalleryENSG00000269210
Gene ExpressionLOC375196 [ NCBI-GEO ]   LOC375196 [ EBI - ARRAY_EXPRESS ]   LOC375196 [ SEEK ]   LOC375196 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC375196 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)375196
GTEX Portal (Tissue expression)LOC375196
Human Protein AtlasENSG00000269210-LOC375196 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC375196
DMDM Disease mutations375196
Blocks (Seattle)LOC375196
Human Protein Atlas [tissue]ENSG00000269210-LOC375196 [tissue]
IPIIPI00296332   
Protein Interaction databases
FunCoupENSG00000269210
BioGRIDLOC375196
STRING (EMBL)LOC375196
ZODIACLOC375196
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease375196
BioCentury BCIQLOC375196
ClinGenLOC375196
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD375196
Clinical trialLOC375196
Miscellaneous
canSAR (ICR)LOC375196 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC375196
EVEXLOC375196
GoPubMedLOC375196
iHOPLOC375196
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:53:13 CET 2017

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