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LOC389705 (chromosome 4 open reading frame 27 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 389705
Atlas_Id 68097
Location 9p22.3  [Link to chromosome band 9p22]
Location_base_pair Starts at 14993327 and ends at 15019724 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC389705  389705  chromosome 4 open reading frame 27 pseudogene
Aliases
GeneCards (Weizmann)LOC389705
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:14993327-15019724 [Contig_View]  LOC389705 [Vega]
TCGA cBioPortalLOC389705
AceView (NCBI)LOC389705
Genatlas (Paris)LOC389705
WikiGenes389705
SOURCE (Princeton)LOC389705
Genetics Home Reference (NIH)LOC389705
Genomic and cartography
GoldenPath hg38 (UCSC)LOC389705  -     chr9:14993327-15019724 +  9p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC389705  -     9p22.3   [Description]    (hg19-Feb_2009)
EnsemblLOC389705 - 9p22.3 [CytoView hg19]  LOC389705 - 9p22.3 [CytoView hg38]
Mapping of homologs : NCBILOC389705 [Mapview hg19]  LOC389705 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI467879 BG719281
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC389705
Cluster EST : UnigeneHs.431257 [ NCBI ]
CGAP (NCI)Hs.431257
Gene ExpressionLOC389705 [ NCBI-GEO ]   LOC389705 [ EBI - ARRAY_EXPRESS ]   LOC389705 [ SEEK ]   LOC389705 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC389705 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)389705
GTEX Portal (Tissue expression)LOC389705
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC389705
DMDM Disease mutations389705
Blocks (Seattle)LOC389705
Protein Interaction databases
BioGRIDLOC389705
STRING (EMBL)LOC389705
ZODIACLOC389705
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease389705
BioCentury BCIQLOC389705
ClinGenLOC389705
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389705
Clinical trialLOC389705
Miscellaneous
canSAR (ICR)LOC389705 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC389705
EVEXLOC389705
GoPubMedLOC389705
iHOPLOC389705
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:56:42 CET 2017

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