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LOC389895 (chromosome 16 open reading frame 72-like)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 389895
Atlas_Id 68100
Location Xq27.1  [Link to chromosome band Xq27]
Location_base_pair Starts at 140091667 and ends at 140092911 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC389895  389895  chromosome 16 open reading frame 72-like
Aliases
GeneCards (Weizmann)LOC389895
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:140091667-140092911 [Contig_View]  LOC389895 [Vega]
TCGA cBioPortalLOC389895
AceView (NCBI)LOC389895
Genatlas (Paris)LOC389895
WikiGenes389895
SOURCE (Princeton)LOC389895
Genetics Home Reference (NIH)LOC389895
Genomic and cartography
GoldenPath hg38 (UCSC)LOC389895  -     chrX:140091667-140092911 +  Xq27.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC389895  -     Xq27.1   [Description]    (hg19-Feb_2009)
EnsemblLOC389895 - Xq27.1 [CytoView hg19]  LOC389895 - Xq27.1 [CytoView hg38]
Mapping of homologs : NCBILOC389895 [Mapview hg19]  LOC389895 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA608813 AA865737 AW006167 BM701778
RefSeq transcript (Entrez)NM_001271560
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC389895
Cluster EST : UnigeneHs.127679 [ NCBI ]
CGAP (NCI)Hs.127679
Gene ExpressionLOC389895 [ NCBI-GEO ]   LOC389895 [ EBI - ARRAY_EXPRESS ]   LOC389895 [ SEEK ]   LOC389895 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC389895 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)389895
GTEX Portal (Tissue expression)LOC389895
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC389895
DMDM Disease mutations389895
Blocks (Seattle)LOC389895
Protein Interaction databases
BioGRIDLOC389895
STRING (EMBL)LOC389895
ZODIACLOC389895
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease389895
BioCentury BCIQLOC389895
ClinGenLOC389895
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389895
Clinical trialLOC389895
Miscellaneous
canSAR (ICR)LOC389895 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC389895
EVEXLOC389895
GoPubMedLOC389895
iHOPLOC389895
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:56:43 CET 2017

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