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LOC389906 (zinc finger protein 839 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 389906
Atlas_Id 68101
Location Xp22.33  [Link to chromosome band Xp22]
Location_base_pair Starts at 3817528 and ends at 3843857 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC389906  389906  zinc finger protein 839 pseudogene
Aliases
GeneCards (Weizmann)LOC389906
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:3817528-3843857 [Contig_View]  LOC389906 [Vega]
TCGA cBioPortalLOC389906
AceView (NCBI)LOC389906
Genatlas (Paris)LOC389906
WikiGenes389906
SOURCE (Princeton)LOC389906
Genetics Home Reference (NIH)LOC389906
Genomic and cartography
GoldenPath hg38 (UCSC)LOC389906  -     chrX:3817528-3843857 -  Xp22.33   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC389906  -     Xp22.33   [Description]    (hg19-Feb_2009)
EnsemblLOC389906 - Xp22.33 [CytoView hg19]  LOC389906 - Xp22.33 [CytoView hg38]
Mapping of homologs : NCBILOC389906 [Mapview hg19]  LOC389906 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC017231 BC017239 BC031508 BC035462 BC038894
RefSeq transcript (Entrez)NM_001045547
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC389906
Cluster EST : UnigeneHs.636199 [ NCBI ]
CGAP (NCI)Hs.636199
Gene ExpressionLOC389906 [ NCBI-GEO ]   LOC389906 [ EBI - ARRAY_EXPRESS ]   LOC389906 [ SEEK ]   LOC389906 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC389906 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)389906
GTEX Portal (Tissue expression)LOC389906
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC389906
DMDM Disease mutations389906
Blocks (Seattle)LOC389906
IPIIPI00982491   
Protein Interaction databases
BioGRIDLOC389906
STRING (EMBL)LOC389906
ZODIACLOC389906
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease389906
BioCentury BCIQLOC389906
ClinGenLOC389906
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD389906
Clinical trialLOC389906
Miscellaneous
canSAR (ICR)LOC389906 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC389906
EVEXLOC389906
GoPubMedLOC389906
iHOPLOC389906
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:53:19 CET 2017

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