Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC399886 (uncharacterized LOC399886)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 399886
Atlas_Id 68116
Location 11p11.2  [Link to chromosome band 11p11]
Location_base_pair Starts at 45371397 and ends at 45388508 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC399886  399886  uncharacterized LOC399886
Aliases
GeneCards (Weizmann)LOC399886
Ensembl hg19 (Hinxton)ENSG00000255267 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000255267 [Gene_View]  chr11:45371397-45388508 [Contig_View]  LOC399886 [Vega]
ICGC DataPortalENSG00000255267
TCGA cBioPortalLOC399886
AceView (NCBI)LOC399886
Genatlas (Paris)LOC399886
WikiGenes399886
SOURCE (Princeton)LOC399886
Genetics Home Reference (NIH)LOC399886
Genomic and cartography
GoldenPath hg38 (UCSC)LOC399886  -     chr11:45371397-45388508 +  11p11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC399886  -     11p11.2   [Description]    (hg19-Feb_2009)
EnsemblLOC399886 - 11p11.2 [CytoView hg19]  LOC399886 - 11p11.2 [CytoView hg38]
Mapping of homologs : NCBILOC399886 [Mapview hg19]  LOC399886 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123417 BC130636 BC130638
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC399886
Cluster EST : UnigeneHs.559970 [ NCBI ]
CGAP (NCI)Hs.559970
Alternative Splicing GalleryENSG00000255267
Gene ExpressionLOC399886 [ NCBI-GEO ]   LOC399886 [ EBI - ARRAY_EXPRESS ]   LOC399886 [ SEEK ]   LOC399886 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC399886 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)399886
GTEX Portal (Tissue expression)LOC399886
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC399886
DMDM Disease mutations399886
Blocks (Seattle)LOC399886
Human Protein AtlasENSG00000255267
HPRD13453
IPIIPI00419182   
Protein Interaction databases
FunCoupENSG00000255267
BioGRIDLOC399886
STRING (EMBL)LOC399886
ZODIACLOC399886
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease399886
BioCentury BCIQLOC399886
ClinGenLOC399886
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD399886
Clinical trialLOC399886
Miscellaneous
canSAR (ICR)LOC399886 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC399886
EVEXLOC399886
GoPubMedLOC399886
iHOPLOC399886
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:25:11 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.