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LOC400541 (uncharacterized LOC400541)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 400541
Atlas_Id 68123
Location 16q22.1  [Link to chromosome band 16q22]
Location_base_pair Starts at 70190243 and ends at 70207351 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC400541  400541  uncharacterized LOC400541
Aliases
GeneCards (Weizmann)LOC400541
Ensembl hg19 (Hinxton)ENSG00000247228 [Gene_View]  chr16:70190243-70207351 [Contig_View]  LOC400541 [Vega]
Ensembl hg38 (Hinxton)ENSG00000247228 [Gene_View]  chr16:70190243-70207351 [Contig_View]  LOC400541 [Vega]
ICGC DataPortalENSG00000247228
TCGA cBioPortalLOC400541
AceView (NCBI)LOC400541
Genatlas (Paris)LOC400541
WikiGenes400541
SOURCE (Princeton)LOC400541
Genetics Home Reference (NIH)LOC400541
Genomic and cartography
GoldenPath hg19 (UCSC)LOC400541  -     chr16:70190243-70207351 -  16q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC400541  -     16q22.1   [Description]    (hg38-Dec_2013)
EnsemblLOC400541 - 16q22.1 [CytoView hg19]  LOC400541 - 16q22.1 [CytoView hg38]
Mapping of homologs : NCBILOC400541 [Mapview hg19]  LOC400541 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096066 DA622211 HG508225 HG508226
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_010498 NW_004929402
Consensus coding sequences : CCDS (NCBI)LOC400541
Cluster EST : UnigeneHs.461183 [ NCBI ]
CGAP (NCI)Hs.461183
Alternative Splicing GalleryENSG00000247228
Gene ExpressionLOC400541 [ NCBI-GEO ]   LOC400541 [ EBI - ARRAY_EXPRESS ]   LOC400541 [ SEEK ]   LOC400541 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC400541 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400541
GTEX Portal (Tissue expression)LOC400541
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC400541
DMDM Disease mutations400541
Blocks (Seattle)LOC400541
Human Protein AtlasENSG00000247228
Protein Interaction databases
FunCoupENSG00000247228
BioGRIDLOC400541
STRING (EMBL)LOC400541
ZODIACLOC400541
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease400541
BioCentury BCIQLOC400541
ClinGenLOC400541
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400541
Clinical trialLOC400541
Miscellaneous
canSAR (ICR)LOC400541 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC400541
EVEXLOC400541
GoPubMedLOC400541
iHOPLOC400541
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:25:16 CET 2017

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