Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC400553 (uncharacterized LOC400553)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 400553
Atlas_Id 68125
Location 16q24.2  [Link to chromosome band 16q24]
Location_base_pair Starts at 88099409 and ends at 88100985 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC400553  400553  uncharacterized LOC400553
Aliases
GeneCards (Weizmann)LOC400553
Ensembl hg19 (Hinxton)ENSG00000205037 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000205037 [Gene_View]  chr16:88099409-88100985 [Contig_View]  LOC400553 [Vega]
ICGC DataPortalENSG00000205037
TCGA cBioPortalLOC400553
AceView (NCBI)LOC400553
Genatlas (Paris)LOC400553
WikiGenes400553
SOURCE (Princeton)LOC400553
Genetics Home Reference (NIH)LOC400553
Genomic and cartography
GoldenPath hg38 (UCSC)LOC400553  -     chr16:88099409-88100985 -  16q24.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC400553  -     16q24.2   [Description]    (hg19-Feb_2009)
EnsemblLOC400553 - 16q24.2 [CytoView hg19]  LOC400553 - 16q24.2 [CytoView hg38]
Mapping of homologs : NCBILOC400553 [Mapview hg19]  LOC400553 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK126852 CK004584
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC400553
Cluster EST : UnigeneHs.592071 [ NCBI ]
CGAP (NCI)Hs.592071
Alternative Splicing GalleryENSG00000205037
Gene ExpressionLOC400553 [ NCBI-GEO ]   LOC400553 [ EBI - ARRAY_EXPRESS ]   LOC400553 [ SEEK ]   LOC400553 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC400553 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400553
GTEX Portal (Tissue expression)LOC400553
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC400553
DMDM Disease mutations400553
Blocks (Seattle)LOC400553
Human Protein AtlasENSG00000205037
IPIIPI00887268   
Protein Interaction databases
FunCoupENSG00000205037
BioGRIDLOC400553
STRING (EMBL)LOC400553
ZODIACLOC400553
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease400553
BioCentury BCIQLOC400553
ClinGenLOC400553
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400553
Clinical trialLOC400553
Miscellaneous
canSAR (ICR)LOC400553 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC400553
EVEXLOC400553
GoPubMedLOC400553
iHOPLOC400553
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:22:46 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.