Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC400627 (uncharacterized LOC400627)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 400627
Atlas_Id 77061
Location 17q25.3  [Link to chromosome band 17q25]
Location_base_pair Starts at 80968220 and ends at 80971078 bp from pter ( according to hg38-Dec_2013)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC400627  400627  uncharacterized LOC400627
Aliases
GeneCards (Weizmann)LOC400627
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:80968220-80971078 [Contig_View]  LOC400627 [Vega]
TCGA cBioPortalLOC400627
AceView (NCBI)LOC400627
Genatlas (Paris)LOC400627
WikiGenes400627
SOURCE (Princeton)LOC400627
Genetics Home Reference (NIH)LOC400627
Genomic and cartography
GoldenPath hg38 (UCSC)LOC400627  -     chr17:80968220-80971078 -  17q25.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC400627  -     17q25.3   [Description]    (hg19-Feb_2009)
EnsemblLOC400627 - 17q25.3 [CytoView hg19]  LOC400627 - 17q25.3 [CytoView hg38]
Mapping of homologs : NCBILOC400627 [Mapview hg19]  LOC400627 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK097131 AK127919
RefSeq transcript (Entrez)NM_207458
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC400627
Cluster EST : UnigeneHs.591201 [ NCBI ]
CGAP (NCI)Hs.591201
Gene ExpressionLOC400627 [ NCBI-GEO ]   LOC400627 [ EBI - ARRAY_EXPRESS ]   LOC400627 [ SEEK ]   LOC400627 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC400627 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)400627
GTEX Portal (Tissue expression)LOC400627
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC400627
DMDM Disease mutations400627
Blocks (Seattle)LOC400627
HPRD16999
IPIIPI00410527   
Protein Interaction databases
BioGRIDLOC400627
STRING (EMBL)LOC400627
ZODIACLOC400627
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease400627
BioCentury BCIQLOC400627
ClinGenLOC400627
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD400627
Clinical trialLOC400627
Miscellaneous
canSAR (ICR)LOC400627 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC400627
EVEXLOC400627
GoPubMedLOC400627
iHOPLOC400627
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:22:47 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.