Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC400682 (zinc finger protein 100-like)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 400682
Atlas_Id 68136
Location 19p12  [Link to chromosome band 19p12]
Location_base_pair Starts at 21649668 and ends at 21658608 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC400682    zinc finger protein 100-like
Aliases
GeneCards (Weizmann)LOC400682
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr19:21649668-21658608 [Contig_View]  LOC400682 [Vega]
TCGA cBioPortalLOC400682
AceView (NCBI)LOC400682
Genatlas (Paris)LOC400682
SOURCE (Princeton)LOC400682
Genetics Home Reference (NIH)LOC400682
Genomic and cartography
GoldenPath hg38 (UCSC)LOC400682  -     chr19:21649668-21658608 +  19p12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC400682  -     19p12   [Description]    (hg19-Feb_2009)
GoldenPathLOC400682 - 19p12 [CytoView hg19]  LOC400682 - 19p12 [CytoView hg38]
Genome Data Viewer NCBILOC400682 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)BX647610
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC400682
Gene ExpressionLOC400682 [ NCBI-GEO ]   LOC400682 [ EBI - ARRAY_EXPRESS ]   LOC400682 [ SEEK ]   LOC400682 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC400682 [ Firebrowse - Broad ]
GenevisibleExpression of LOC400682 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)400682
GTEX Portal (Tissue expression)LOC400682
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC400682
Protein Interaction databases
BioGRIDLOC400682
STRING (EMBL)LOC400682
ZODIACLOC400682
Ontologies - Pathways
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
EVEXLOC400682
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Jan 20 13:35:05 CET 2022

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.