Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC401177 (uncharacterized LOC401177)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 401177
Atlas_Id 68167
Location 5p15.1  [Link to chromosome band 5p15]
Location_base_pair Starts at 17379015 and ends at 17387419 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC401177  401177  uncharacterized LOC401177
Aliases
GeneCards (Weizmann)LOC401177
Ensembl hg19 (Hinxton)ENSG00000250822 [Gene_View]  chr5:17379015-17387419 [Contig_View]  LOC401177 [Vega]
Ensembl hg38 (Hinxton)ENSG00000250822 [Gene_View]  chr5:17379015-17387419 [Contig_View]  LOC401177 [Vega]
ICGC DataPortalENSG00000250822
TCGA cBioPortalLOC401177
AceView (NCBI)LOC401177
Genatlas (Paris)LOC401177
WikiGenes401177
SOURCE (Princeton)LOC401177
Genetics Home Reference (NIH)LOC401177
Genomic and cartography
GoldenPath hg19 (UCSC)LOC401177  -     chr5:17379015-17387419 -  5p15.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC401177  -     5p15.1   [Description]    (hg38-Dec_2013)
EnsemblLOC401177 - 5p15.1 [CytoView hg19]  LOC401177 - 5p15.1 [CytoView hg38]
Mapping of homologs : NCBILOC401177 [Mapview hg19]  LOC401177 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC052942 HG497798
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000005 NC_018916 NT_006576 NW_004929321
Consensus coding sequences : CCDS (NCBI)LOC401177
Cluster EST : UnigeneHs.508311 [ NCBI ]
CGAP (NCI)Hs.508311
Alternative Splicing GalleryENSG00000250822
Gene ExpressionLOC401177 [ NCBI-GEO ]   LOC401177 [ EBI - ARRAY_EXPRESS ]   LOC401177 [ SEEK ]   LOC401177 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC401177 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401177
GTEX Portal (Tissue expression)LOC401177
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC401177
DMDM Disease mutations401177
Blocks (Seattle)LOC401177
Human Protein AtlasENSG00000250822
Protein Interaction databases
FunCoupENSG00000250822
BioGRIDLOC401177
STRING (EMBL)LOC401177
ZODIACLOC401177
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease401177
BioCentury BCIQLOC401177
ClinGenLOC401177
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401177
Clinical trialLOC401177
Miscellaneous
canSAR (ICR)LOC401177 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC401177
EVEXLOC401177
GoPubMedLOC401177
iHOPLOC401177
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:25:26 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.