Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC401471 (uncharacterized LOC401471)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 401471
Atlas_Id 77473
Location 8q22.3  [Link to chromosome band 8q22]
Location_base_pair Starts at 101006977 and ends at 101017514 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC401471  401471  uncharacterized LOC401471
Aliases
GeneCards (Weizmann)LOC401471
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr8:101006977-101017514 [Contig_View]  LOC401471 [Vega]
TCGA cBioPortalLOC401471
AceView (NCBI)LOC401471
Genatlas (Paris)LOC401471
WikiGenes401471
SOURCE (Princeton)LOC401471
Genetics Home Reference (NIH)LOC401471
Genomic and cartography
GoldenPath hg38 (UCSC)LOC401471  -     chr8:101006977-101017514 +  8q22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC401471  -     8q22.3   [Description]    (hg19-Feb_2009)
EnsemblLOC401471 - 8q22.3 [CytoView hg19]  LOC401471 - 8q22.3 [CytoView hg38]
Mapping of homologs : NCBILOC401471 [Mapview hg19]  LOC401471 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125891
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC401471
Cluster EST : UnigeneHs.521719 [ NCBI ]
CGAP (NCI)Hs.521719
Gene ExpressionLOC401471 [ NCBI-GEO ]   LOC401471 [ EBI - ARRAY_EXPRESS ]   LOC401471 [ SEEK ]   LOC401471 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC401471 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401471
GTEX Portal (Tissue expression)LOC401471
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC401471
DMDM Disease mutations401471
Blocks (Seattle)LOC401471
Protein Interaction databases
BioGRIDLOC401471
STRING (EMBL)LOC401471
ZODIACLOC401471
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease401471
BioCentury BCIQLOC401471
ClinGenLOC401471
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401471
Clinical trialLOC401471
Miscellaneous
canSAR (ICR)LOC401471 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC401471
EVEXLOC401471
GoPubMedLOC401471
iHOPLOC401471
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:10:07 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.