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LOC401554 (uncharacterized LOC401554)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 401554
Atlas_Id 76631
Location 9q34.11  [Link to chromosome band 9q34]
Location_base_pair Starts at 130140610 and ends at 130144219 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC401554  401554  uncharacterized LOC401554
Aliases
GeneCards (Weizmann)LOC401554
Ensembl hg19 (Hinxton)ENSG00000196979 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000196979 [Gene_View]  chr9:130140610-130144219 [Contig_View]  LOC401554 [Vega]
ICGC DataPortalENSG00000196979
TCGA cBioPortalLOC401554
AceView (NCBI)LOC401554
Genatlas (Paris)LOC401554
WikiGenes401554
SOURCE (Princeton)LOC401554
Genetics Home Reference (NIH)LOC401554
Genomic and cartography
GoldenPath hg38 (UCSC)LOC401554  -     chr9:130140610-130144219 -  9q34.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC401554  -     9q34.11   [Description]    (hg19-Feb_2009)
EnsemblLOC401554 - 9q34.11 [CytoView hg19]  LOC401554 - 9q34.11 [CytoView hg38]
Mapping of homologs : NCBILOC401554 [Mapview hg19]  LOC401554 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK128673 BC132936
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC401554
Cluster EST : UnigeneHs.522437 [ NCBI ]
CGAP (NCI)Hs.522437
Alternative Splicing GalleryENSG00000196979
Gene ExpressionLOC401554 [ NCBI-GEO ]   LOC401554 [ EBI - ARRAY_EXPRESS ]   LOC401554 [ SEEK ]   LOC401554 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC401554 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)401554
GTEX Portal (Tissue expression)LOC401554
Human Protein AtlasENSG00000196979-LOC401554 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC401554
DMDM Disease mutations401554
Blocks (Seattle)LOC401554
Human Protein Atlas [tissue]ENSG00000196979-LOC401554 [tissue]
HPRD13541
IPIIPI00410567   
Protein Interaction databases
FunCoupENSG00000196979
BioGRIDLOC401554
STRING (EMBL)LOC401554
ZODIACLOC401554
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease401554
BioCentury BCIQLOC401554
ClinGenLOC401554
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD401554
Clinical trialLOC401554
Miscellaneous
canSAR (ICR)LOC401554 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC401554
EVEXLOC401554
GoPubMedLOC401554
iHOPLOC401554
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:10:08 CET 2017

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