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LOC440600 (uncharacterized LOC440600)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 440600
Atlas_Id 68215
Location 1p13.3  [Link to chromosome band 1p13]
Location_base_pair Starts at 110286376 and ends at 110339171 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC440600  440600  uncharacterized LOC440600
Aliases
GeneCards (Weizmann)LOC440600
Ensembl hg19 (Hinxton)ENSG00000227963 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000227963 [Gene_View]  chr1:110286376-110339171 [Contig_View]  LOC440600 [Vega]
ICGC DataPortalENSG00000227963
TCGA cBioPortalLOC440600
AceView (NCBI)LOC440600
Genatlas (Paris)LOC440600
WikiGenes440600
SOURCE (Princeton)LOC440600
Genetics Home Reference (NIH)LOC440600
Genomic and cartography
GoldenPath hg38 (UCSC)LOC440600  -     chr1:110286376-110339171 -  1p13.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC440600  -     1p13.3   [Description]    (hg19-Feb_2009)
EnsemblLOC440600 - 1p13.3 [CytoView hg19]  LOC440600 - 1p13.3 [CytoView hg38]
Mapping of homologs : NCBILOC440600 [Mapview hg19]  LOC440600 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC053344
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC440600
Cluster EST : UnigeneHs.649375 [ NCBI ]
CGAP (NCI)Hs.649375
Alternative Splicing GalleryENSG00000227963
Gene ExpressionLOC440600 [ NCBI-GEO ]   LOC440600 [ EBI - ARRAY_EXPRESS ]   LOC440600 [ SEEK ]   LOC440600 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC440600 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440600
GTEX Portal (Tissue expression)LOC440600
Human Protein AtlasENSG00000227963-LOC440600 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC440600
DMDM Disease mutations440600
Blocks (Seattle)LOC440600
Human Protein Atlas [tissue]ENSG00000227963-LOC440600 [tissue]
Protein Interaction databases
FunCoupENSG00000227963
BioGRIDLOC440600
STRING (EMBL)LOC440600
ZODIACLOC440600
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease440600
BioCentury BCIQLOC440600
ClinGenLOC440600
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440600
Clinical trialLOC440600
Miscellaneous
canSAR (ICR)LOC440600 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC440600
EVEXLOC440600
GoPubMedLOC440600
iHOPLOC440600
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Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:10:14 CET 2017

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