Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC440700 (carbonic anhydrase 14 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 440700
Atlas_Id 68217
Location 1q24.1  [Link to chromosome band 1q24]
Location_base_pair Starts at 165698750 and ends at 165709962 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC440700  440700  carbonic anhydrase 14 pseudogene
Aliases
GeneCards (Weizmann)LOC440700
Ensembl hg19 (Hinxton)ENSG00000215838 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000215838 [Gene_View]  chr1:165698750-165709962 [Contig_View]  LOC440700 [Vega]
ICGC DataPortalENSG00000215838
TCGA cBioPortalLOC440700
AceView (NCBI)LOC440700
Genatlas (Paris)LOC440700
WikiGenes440700
SOURCE (Princeton)LOC440700
Genetics Home Reference (NIH)LOC440700
Genomic and cartography
GoldenPath hg38 (UCSC)LOC440700  -     chr1:165698750-165709962 +  1q24.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC440700  -     1q24.1   [Description]    (hg19-Feb_2009)
EnsemblLOC440700 - 1q24.1 [CytoView hg19]  LOC440700 - 1q24.1 [CytoView hg38]
Mapping of homologs : NCBILOC440700 [Mapview hg19]  LOC440700 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC012108
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC440700
Cluster EST : UnigeneHs.568703 [ NCBI ]
CGAP (NCI)Hs.568703
Alternative Splicing GalleryENSG00000215838
Gene ExpressionLOC440700 [ NCBI-GEO ]   LOC440700 [ EBI - ARRAY_EXPRESS ]   LOC440700 [ SEEK ]   LOC440700 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC440700 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)440700
GTEX Portal (Tissue expression)LOC440700
Human Protein AtlasENSG00000215838-LOC440700 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC440700
DMDM Disease mutations440700
Blocks (Seattle)LOC440700
Human Protein Atlas [tissue]ENSG00000215838-LOC440700 [tissue]
Protein Interaction databases
FunCoupENSG00000215838
BioGRIDLOC440700
STRING (EMBL)LOC440700
ZODIACLOC440700
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease440700
BioCentury BCIQLOC440700
ClinGenLOC440700
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD440700
Clinical trialLOC440700
Miscellaneous
canSAR (ICR)LOC440700 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC440700
EVEXLOC440700
GoPubMedLOC440700
iHOPLOC440700
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:10:14 CET 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.