Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LOC442497 (uncharacterized LOC442497)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 442497
Atlas_Id 68252
Location 7p22.3  [Link to chromosome band 7p22]
Location_base_pair Starts at 379425 and ends at 382879 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)		Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 

External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC442497  442497  uncharacterized LOC442497
Aliases
GeneCards (Weizmann)LOC442497
Ensembl hg19 (Hinxton)ENSG00000249574 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000249574 [Gene_View]  chr7:379425-382879 [Contig_View]  LOC442497 [Vega]
ICGC DataPortalENSG00000249574
TCGA cBioPortalLOC442497
AceView (NCBI)LOC442497
Genatlas (Paris)LOC442497
WikiGenes442497
SOURCE (Princeton)LOC442497
Genetics Home Reference (NIH)LOC442497
Genomic and cartography
GoldenPath hg38 (UCSC)LOC442497  -     chr7:379425-382879 +  7p22.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC442497  -     7p22.3   [Description]    (hg19-Feb_2009)
EnsemblLOC442497 - 7p22.3 [CytoView hg19]  LOC442497 - 7p22.3 [CytoView hg38]
Mapping of homologs : NCBILOC442497 [Mapview hg19]  LOC442497 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK092540
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC442497
Cluster EST : UnigeneHs.704269 [ NCBI ]
CGAP (NCI)Hs.704269
Alternative Splicing GalleryENSG00000249574
Gene ExpressionLOC442497 [ NCBI-GEO ]   LOC442497 [ EBI - ARRAY_EXPRESS ]   LOC442497 [ SEEK ]   LOC442497 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC442497 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)442497
GTEX Portal (Tissue expression)LOC442497
Human Protein AtlasENSG00000249574-LOC442497 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC442497
DMDM Disease mutations442497
Blocks (Seattle)LOC442497
Human Protein Atlas [tissue]ENSG00000249574-LOC442497 [tissue]
Protein Interaction databases
FunCoupENSG00000249574
BioGRIDLOC442497
STRING (EMBL)LOC442497
ZODIACLOC442497
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease442497
BioCentury BCIQLOC442497
ClinGenLOC442497
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD442497
Clinical trialLOC442497
Miscellaneous
canSAR (ICR)LOC442497 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC442497
EVEXLOC442497
GoPubMedLOC442497
iHOPLOC442497
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Fri Feb 23 18:37:34 CET 2018
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