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LOC494141 (solute carrier family 25 member 51 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 494141
Atlas_Id 68255
Location 11p15.1  [Link to chromosome band 11p15]
Location_base_pair Starts at 18209138 and ends at 18211508 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC494141  494141  solute carrier family 25 member 51 pseudogene
Aliases
GeneCards (Weizmann)LOC494141
Ensembl hg19 (Hinxton)ENSG00000189332 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000189332 [Gene_View]  chr11:18209138-18211508 [Contig_View]  LOC494141 [Vega]
ICGC DataPortalENSG00000189332
TCGA cBioPortalLOC494141
AceView (NCBI)LOC494141
Genatlas (Paris)LOC494141
WikiGenes494141
SOURCE (Princeton)LOC494141
Genetics Home Reference (NIH)LOC494141
Genomic and cartography
GoldenPath hg38 (UCSC)LOC494141  -     chr11:18209138-18211508 +  11p15.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC494141  -     11p15.1   [Description]    (hg19-Feb_2009)
EnsemblLOC494141 - 11p15.1 [CytoView hg19]  LOC494141 - 11p15.1 [CytoView hg38]
Mapping of homologs : NCBILOC494141 [Mapview hg19]  LOC494141 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK131059 BC026079 BC026082 BC034967 BC044592
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC494141
Cluster EST : UnigeneHs.446327 [ NCBI ]
CGAP (NCI)Hs.446327
Alternative Splicing GalleryENSG00000189332
Gene ExpressionLOC494141 [ NCBI-GEO ]   LOC494141 [ EBI - ARRAY_EXPRESS ]   LOC494141 [ SEEK ]   LOC494141 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC494141 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)494141
GTEX Portal (Tissue expression)LOC494141
Human Protein AtlasENSG00000189332-LOC494141 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC494141
DMDM Disease mutations494141
Blocks (Seattle)LOC494141
Human Protein Atlas [tissue]ENSG00000189332-LOC494141 [tissue]
IPIIPI00385049   
Protein Interaction databases
FunCoupENSG00000189332
BioGRIDLOC494141
STRING (EMBL)LOC494141
ZODIACLOC494141
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease494141
BioCentury BCIQLOC494141
ClinGenLOC494141
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD494141
Clinical trialLOC494141
Miscellaneous
canSAR (ICR)LOC494141 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC494141
EVEXLOC494141
GoPubMedLOC494141
iHOPLOC494141
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:10:22 CET 2017

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