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LOC553137 (uncharacterized LOC553137)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 553137
Atlas_Id 68263
Location 6q21  [Link to chromosome band 6q21]
Location_base_pair Starts at 106770130 and ends at 106775002 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC553137  553137  uncharacterized LOC553137
Aliases
GeneCards (Weizmann)LOC553137
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:106770130-106775002 [Contig_View]  LOC553137 [Vega]
TCGA cBioPortalLOC553137
AceView (NCBI)LOC553137
Genatlas (Paris)LOC553137
WikiGenes553137
SOURCE (Princeton)LOC553137
Genetics Home Reference (NIH)LOC553137
Genomic and cartography
GoldenPath hg38 (UCSC)LOC553137  -     chr6:106770130-106775002 -  6q21   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC553137  -     6q21   [Description]    (hg19-Feb_2009)
EnsemblLOC553137 - 6q21 [CytoView hg19]  LOC553137 - 6q21 [CytoView hg38]
Mapping of homologs : NCBILOC553137 [Mapview hg19]  LOC553137 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK123416
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC553137
Cluster EST : UnigeneHs.729217 [ NCBI ]
CGAP (NCI)Hs.729217
Gene ExpressionLOC553137 [ NCBI-GEO ]   LOC553137 [ EBI - ARRAY_EXPRESS ]   LOC553137 [ SEEK ]   LOC553137 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC553137 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)553137
GTEX Portal (Tissue expression)LOC553137
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC553137
DMDM Disease mutations553137
Blocks (Seattle)LOC553137
Protein Interaction databases
BioGRIDLOC553137
STRING (EMBL)LOC553137
ZODIACLOC553137
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease553137
BioCentury BCIQLOC553137
ClinGenLOC553137
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD553137
Clinical trialLOC553137
Miscellaneous
canSAR (ICR)LOC553137 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC553137
EVEXLOC553137
GoPubMedLOC553137
iHOPLOC553137
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:10:18 CEST 2018

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