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LOC554206 (leucine carboxyl methyltransferase 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 554206
Atlas_Id 68265
Location 16p12.1  [Link to chromosome band 16p12]
Location_base_pair Starts at 25043062 and ends at 25044098 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC554206  554206  leucine carboxyl methyltransferase 1 pseudogene
Aliases
GeneCards (Weizmann)LOC554206
Ensembl hg19 (Hinxton)ENSG00000262587 [Gene_View]  chr16:25043062-25044098 [Contig_View]  LOC554206 [Vega]
Ensembl hg38 (Hinxton)ENSG00000262587 [Gene_View]  chr16:25043062-25044098 [Contig_View]  LOC554206 [Vega]
ICGC DataPortalENSG00000262587
TCGA cBioPortalLOC554206
AceView (NCBI)LOC554206
Genatlas (Paris)LOC554206
WikiGenes554206
SOURCE (Princeton)LOC554206
Genetics Home Reference (NIH)LOC554206
Genomic and cartography
GoldenPath hg19 (UCSC)LOC554206  -     chr16:25043062-25044098 +  16p12.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC554206  -     16p12.1   [Description]    (hg38-Dec_2013)
EnsemblLOC554206 - 16p12.1 [CytoView hg19]  LOC554206 - 16p12.1 [CytoView hg38]
Mapping of homologs : NCBILOC554206 [Mapview hg19]  LOC554206 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AI553759 AI696363 AK097891 BC029609 BX116226
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000016 NC_018927 NT_187260 NW_004929400
Consensus coding sequences : CCDS (NCBI)LOC554206
Cluster EST : UnigeneHs.552959 [ NCBI ]
CGAP (NCI)Hs.552959
Alternative Splicing GalleryENSG00000262587
Gene ExpressionLOC554206 [ NCBI-GEO ]   LOC554206 [ EBI - ARRAY_EXPRESS ]   LOC554206 [ SEEK ]   LOC554206 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC554206 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)554206
GTEX Portal (Tissue expression)LOC554206
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC554206
DMDM Disease mutations554206
Blocks (Seattle)LOC554206
Human Protein AtlasENSG00000262587
IPIIPI00166059   
Protein Interaction databases
FunCoupENSG00000262587
BioGRIDLOC554206
STRING (EMBL)LOC554206
ZODIACLOC554206
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease554206
BioCentury BCIQLOC554206
ClinGenLOC554206
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD554206
Clinical trialLOC554206
Miscellaneous
canSAR (ICR)LOC554206 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC554206
EVEXLOC554206
GoPubMedLOC554206
iHOPLOC554206
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:25:48 CET 2017

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