Atlas of Genetics and Cytogenetics in Oncology and Haematology


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LOC642236 (FSHD region gene 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 642236
Atlas_Id 68280
Location 9q13  [Link to chromosome band 9q13]
Location_base_pair Starts at 68427783 and ends at 68454375 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC642236  642236  FSHD region gene 1 pseudogene
Aliases
GeneCards (Weizmann)LOC642236
Ensembl hg19 (Hinxton) [Gene_View]  chr9:68427783-68454375 [Contig_View]  LOC642236 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:68427783-68454375 [Contig_View]  LOC642236 [Vega]
TCGA cBioPortalLOC642236
AceView (NCBI)LOC642236
Genatlas (Paris)LOC642236
WikiGenes642236
SOURCE (Princeton)LOC642236
Genetics Home Reference (NIH)LOC642236
Genomic and cartography
GoldenPath hg19 (UCSC)LOC642236  -     chr9:68427783-68454375 -  9q13   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC642236  -     9q13   [Description]    (hg38-Dec_2013)
EnsemblLOC642236 - 9q13 [CytoView hg19]  LOC642236 - 9q13 [CytoView hg38]
Mapping of homologs : NCBILOC642236 [Mapview hg19]  LOC642236 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK057099 BC063132
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000009 NC_018920 NT_078067 NW_004929359
Consensus coding sequences : CCDS (NCBI)LOC642236
Cluster EST : UnigeneHs.650100 [ NCBI ]
CGAP (NCI)Hs.650100
Gene ExpressionLOC642236 [ NCBI-GEO ]   LOC642236 [ EBI - ARRAY_EXPRESS ]   LOC642236 [ SEEK ]   LOC642236 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC642236 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)642236
GTEX Portal (Tissue expression)LOC642236
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC642236
DMDM Disease mutations642236
Blocks (Seattle)LOC642236
IPIIPI00387140   
Protein Interaction databases
BioGRIDLOC642236
STRING (EMBL)LOC642236
ZODIACLOC642236
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease642236
BioCentury BCIQLOC642236
ClinGenLOC642236
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642236
Clinical trialLOC642236
Miscellaneous
canSAR (ICR)LOC642236 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC642236
EVEXLOC642236
GoPubMedLOC642236
iHOPLOC642236
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:25:51 CET 2017

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