Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC642929 (general transcription factor II, i pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 642929
Atlas_Id 68295
Location 9q21.11  [Link to chromosome band 9q21]
Location_base_pair Starts at 66159959 and ends at 66164906 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC642929  642929  general transcription factor II, i pseudogene
Aliases
GeneCards (Weizmann)LOC642929
Ensembl hg19 (Hinxton)ENSG00000278849 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000278849 [Gene_View]  chr9:66159959-66164906 [Contig_View]  LOC642929 [Vega]
ICGC DataPortalENSG00000278849
TCGA cBioPortalLOC642929
AceView (NCBI)LOC642929
Genatlas (Paris)LOC642929
WikiGenes642929
SOURCE (Princeton)LOC642929
Genetics Home Reference (NIH)LOC642929
Genomic and cartography
GoldenPath hg38 (UCSC)LOC642929  -     chr9:66159959-66164906 -  9q21.11   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC642929  -     9q21.11   [Description]    (hg19-Feb_2009)
EnsemblLOC642929 - 9q21.11 [CytoView hg19]  LOC642929 - 9q21.11 [CytoView hg38]
Mapping of homologs : NCBILOC642929 [Mapview hg19]  LOC642929 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DQ786189
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC642929
Cluster EST : UnigeneHs.584288 [ NCBI ]
CGAP (NCI)Hs.584288
Alternative Splicing GalleryENSG00000278849
Gene ExpressionLOC642929 [ NCBI-GEO ]   LOC642929 [ EBI - ARRAY_EXPRESS ]   LOC642929 [ SEEK ]   LOC642929 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC642929 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)642929
GTEX Portal (Tissue expression)LOC642929
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC642929
DMDM Disease mutations642929
Blocks (Seattle)LOC642929
Human Protein AtlasENSG00000278849
IPIIPI00984597   
Protein Interaction databases
FunCoupENSG00000278849
BioGRIDLOC642929
STRING (EMBL)LOC642929
ZODIACLOC642929
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease642929
BioCentury BCIQLOC642929
ClinGenLOC642929
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642929
Clinical trialLOC642929
Miscellaneous
canSAR (ICR)LOC642929 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC642929
EVEXLOC642929
GoPubMedLOC642929
iHOPLOC642929
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:23:31 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.