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LOC642943 (SPATA31 subfamily A pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 642943
Atlas_Id 68297
Location 9q22.31  [Link to chromosome band 9q22]
Location_base_pair Starts at 92882567 and ends at 92889555 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC642943  642943  SPATA31 subfamily A pseudogene
Aliases
GeneCards (Weizmann)LOC642943
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr9:92882567-92889555 [Contig_View]  LOC642943 [Vega]
TCGA cBioPortalLOC642943
AceView (NCBI)LOC642943
Genatlas (Paris)LOC642943
WikiGenes642943
SOURCE (Princeton)LOC642943
Genetics Home Reference (NIH)LOC642943
Genomic and cartography
GoldenPath hg38 (UCSC)LOC642943  -     chr9:92882567-92889555 +  9q22.31   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC642943  -     9q22.31   [Description]    (hg19-Feb_2009)
EnsemblLOC642943 - 9q22.31 [CytoView hg19]  LOC642943 - 9q22.31 [CytoView hg38]
Mapping of homologs : NCBILOC642943 [Mapview hg19]  LOC642943 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC050023 BX097312 DB062721 DQ582716 HY033202
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC642943
Cluster EST : UnigeneHs.643602 [ NCBI ]
CGAP (NCI)Hs.643602
Gene ExpressionLOC642943 [ NCBI-GEO ]   LOC642943 [ EBI - ARRAY_EXPRESS ]   LOC642943 [ SEEK ]   LOC642943 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC642943 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)642943
GTEX Portal (Tissue expression)LOC642943
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC642943
DMDM Disease mutations642943
Blocks (Seattle)LOC642943
Protein Interaction databases
BioGRIDLOC642943
STRING (EMBL)LOC642943
ZODIACLOC642943
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease642943
BioCentury BCIQLOC642943
ClinGenLOC642943
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642943
Clinical trialLOC642943
Miscellaneous
canSAR (ICR)LOC642943 (select the gene name)
Probes
Litterature
PubMed2 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC642943
EVEXLOC642943
GoPubMedLOC642943
iHOPLOC642943
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:25:41 CEST 2017

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