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LOC642980 (uncharacterized LOC642980)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 642980
Atlas_Id 68298
Location Xq28  [Link to chromosome band Xq28]
Location_base_pair Starts at 149924159 and ends at 149928224 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC642980  642980  uncharacterized LOC642980
Aliases
GeneCards (Weizmann)LOC642980
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chrX:149924159-149928224 [Contig_View]  LOC642980 [Vega]
TCGA cBioPortalLOC642980
AceView (NCBI)LOC642980
Genatlas (Paris)LOC642980
WikiGenes642980
SOURCE (Princeton)LOC642980
Genetics Home Reference (NIH)LOC642980
Genomic and cartography
GoldenPath hg38 (UCSC)LOC642980  -     chrX:149924159-149928224 -  Xq28   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC642980  -     Xq28   [Description]    (hg19-Feb_2009)
EnsemblLOC642980 - Xq28 [CytoView hg19]  LOC642980 - Xq28 [CytoView hg38]
Mapping of homologs : NCBILOC642980 [Mapview hg19]  LOC642980 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK131413
RefSeq transcript (Entrez)NM_001039761
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC642980
Cluster EST : UnigeneHs.458216 [ NCBI ]
CGAP (NCI)Hs.458216
Gene ExpressionLOC642980 [ NCBI-GEO ]   LOC642980 [ EBI - ARRAY_EXPRESS ]   LOC642980 [ SEEK ]   LOC642980 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC642980 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)642980
GTEX Portal (Tissue expression)LOC642980
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC642980
DMDM Disease mutations642980
Blocks (Seattle)LOC642980
Protein Interaction databases
BioGRIDLOC642980
STRING (EMBL)LOC642980
ZODIACLOC642980
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease642980
BioCentury BCIQLOC642980
ClinGenLOC642980
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD642980
Clinical trialLOC642980
Miscellaneous
canSAR (ICR)LOC642980 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC642980
EVEXLOC642980
GoPubMedLOC642980
iHOPLOC642980
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Nov 20 19:54:06 CET 2017

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