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LOC643327 (uncharacterized LOC643327)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 643327
Atlas_Id 68302
Location 6p25.2  [Link to chromosome band 6p25]
Location_base_pair Starts at 3455703 and ends at 3460798 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC643327  643327  uncharacterized LOC643327
Aliases
GeneCards (Weizmann)LOC643327
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]   [Sequence]  chr6:3455703-3460798 [Contig_View]  LOC643327 [Vega]
TCGA cBioPortalLOC643327
AceView (NCBI)LOC643327
Genatlas (Paris)LOC643327
WikiGenes643327
SOURCE (Princeton)LOC643327
Genetics Home Reference (NIH)LOC643327
Genomic and cartography
GoldenPath hg38 (UCSC)LOC643327  -     chr6:3455703-3460798 +  6p25.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC643327  -     6p25.2   [Description]    (hg19-Feb_2009)
EnsemblLOC643327 - 6p25.2 [CytoView hg19]  LOC643327 - 6p25.2 [CytoView hg38]
Mapping of homologs : NCBILOC643327 [Mapview hg19]  LOC643327 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK096549
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC643327
Cluster EST : UnigeneHs.631820 [ NCBI ]
CGAP (NCI)Hs.631820
Gene ExpressionLOC643327 [ NCBI-GEO ]   LOC643327 [ EBI - ARRAY_EXPRESS ]   LOC643327 [ SEEK ]   LOC643327 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC643327 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643327
GTEX Portal (Tissue expression)LOC643327
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC643327
DMDM Disease mutations643327
Blocks (Seattle)LOC643327
IPIIPI00745188   
Protein Interaction databases
BioGRIDLOC643327
STRING (EMBL)LOC643327
ZODIACLOC643327
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease643327
BioCentury BCIQLOC643327
ClinGenLOC643327
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643327
Clinical trialLOC643327
Miscellaneous
canSAR (ICR)LOC643327 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC643327
EVEXLOC643327
GoPubMedLOC643327
iHOPLOC643327
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Jul 30 14:10:30 CEST 2018

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