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LOC643387 (TAR DNA binding protein pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 643387
Atlas_Id 68305
Location 2q37.3  [Link to chromosome band 2q37]
Location_base_pair Starts at 238231686 and ends at 238234344 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC643387  643387  TAR DNA binding protein pseudogene
Aliases
GeneCards (Weizmann)LOC643387
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr2:238231686-238234344 [Contig_View]  LOC643387 [Vega]
TCGA cBioPortalLOC643387
AceView (NCBI)LOC643387
Genatlas (Paris)LOC643387
WikiGenes643387
SOURCE (Princeton)LOC643387
Genetics Home Reference (NIH)LOC643387
Genomic and cartography
GoldenPath hg38 (UCSC)LOC643387  -     chr2:238231686-238234344 +  2q37.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC643387  -     2q37.3   [Description]    (hg19-Feb_2009)
EnsemblLOC643387 - 2q37.3 [CytoView hg19]  LOC643387 - 2q37.3 [CytoView hg38]
Mapping of homologs : NCBILOC643387 [Mapview hg19]  LOC643387 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BX280126 DA170867
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC643387
Cluster EST : UnigeneHs.598359 [ NCBI ]
CGAP (NCI)Hs.598359
Gene ExpressionLOC643387 [ NCBI-GEO ]   LOC643387 [ EBI - ARRAY_EXPRESS ]   LOC643387 [ SEEK ]   LOC643387 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC643387 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643387
GTEX Portal (Tissue expression)LOC643387
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC643387
DMDM Disease mutations643387
Blocks (Seattle)LOC643387
Protein Interaction databases
BioGRIDLOC643387
STRING (EMBL)LOC643387
ZODIACLOC643387
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease643387
BioCentury BCIQLOC643387
ClinGenLOC643387
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643387
Clinical trialLOC643387
Miscellaneous
canSAR (ICR)LOC643387 (select the gene name)
Probes
Litterature
PubMed16 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC643387
EVEXLOC643387
GoPubMedLOC643387
iHOPLOC643387
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:23:34 CEST 2017

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