Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC643406 (uncharacterized LOC643406)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 643406
Atlas_Id 68306
Location 20p12.3  [Link to chromosome band 20p12]
Location_base_pair Starts at 5451852 and ends at 5457780 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC643406  643406  uncharacterized LOC643406
Aliases
GeneCards (Weizmann)LOC643406
Ensembl hg19 (Hinxton) [Gene_View]  chr20:5451852-5457780 [Contig_View]  LOC643406 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr20:5451852-5457780 [Contig_View]  LOC643406 [Vega]
TCGA cBioPortalLOC643406
AceView (NCBI)LOC643406
Genatlas (Paris)LOC643406
WikiGenes643406
SOURCE (Princeton)LOC643406
Genetics Home Reference (NIH)LOC643406
Genomic and cartography
GoldenPath hg19 (UCSC)LOC643406  -     chr20:5451852-5457780 +  20p12.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC643406  -     20p12.3   [Description]    (hg38-Dec_2013)
EnsemblLOC643406 - 20p12.3 [CytoView hg19]  LOC643406 - 20p12.3 [CytoView hg38]
Mapping of homologs : NCBILOC643406 [Mapview hg19]  LOC643406 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125948 BC031676 HG511151 HG511152
RefSeq transcript (Entrez)NM_175877
RefSeq genomic (Entrez)NC_000020 NC_018931 NT_011387 NW_004929416
Consensus coding sequences : CCDS (NCBI)LOC643406
Cluster EST : UnigeneHs.431161 [ NCBI ]
CGAP (NCI)Hs.431161
Gene ExpressionLOC643406 [ NCBI-GEO ]   LOC643406 [ EBI - ARRAY_EXPRESS ]   LOC643406 [ SEEK ]   LOC643406 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC643406 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643406
GTEX Portal (Tissue expression)LOC643406
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC643406
DMDM Disease mutations643406
Blocks (Seattle)LOC643406
HPRD14595
IPIIPI00395731   IPI00166899   
Protein Interaction databases
BioGRIDLOC643406
STRING (EMBL)LOC643406
ZODIACLOC643406
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease643406
BioCentury BCIQLOC643406
ClinGenLOC643406
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643406
Clinical trialLOC643406
Miscellaneous
canSAR (ICR)LOC643406 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC643406
EVEXLOC643406
GoPubMedLOC643406
iHOPLOC643406
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:25:58 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.