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LOC643454 (adaptor-related protein complex 3, sigma 1 subunit pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 643454
Atlas_Id 68308
Location 1q41  [Link to chromosome band 1q41]
Location_base_pair Starts at 214655882 and ends at 214656819 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC643454  643454  adaptor-related protein complex 3, sigma 1 subunit pseudogene
Aliases
GeneCards (Weizmann)LOC643454
Ensembl hg19 (Hinxton) [Gene_View]  chr1:214655882-214656819 [Contig_View]  LOC643454 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:214655882-214656819 [Contig_View]  LOC643454 [Vega]
TCGA cBioPortalLOC643454
AceView (NCBI)LOC643454
Genatlas (Paris)LOC643454
WikiGenes643454
SOURCE (Princeton)LOC643454
Genetics Home Reference (NIH)LOC643454
Genomic and cartography
GoldenPath hg19 (UCSC)LOC643454  -     chr1:214655882-214656819 -  1q41   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC643454  -     1q41   [Description]    (hg38-Dec_2013)
EnsemblLOC643454 - 1q41 [CytoView hg19]  LOC643454 - 1q41 [CytoView hg38]
Mapping of homologs : NCBILOC643454 [Mapview hg19]  LOC643454 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC157883 BC171896
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_008800 NG_028036 NT_004487 NW_004929294
Consensus coding sequences : CCDS (NCBI)LOC643454
Cluster EST : UnigeneHs.662086 [ NCBI ]
CGAP (NCI)Hs.662086
Gene ExpressionLOC643454 [ NCBI-GEO ]   LOC643454 [ EBI - ARRAY_EXPRESS ]   LOC643454 [ SEEK ]   LOC643454 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC643454 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643454
GTEX Portal (Tissue expression)LOC643454
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC643454
DMDM Disease mutations643454
Blocks (Seattle)LOC643454
Protein Interaction databases
BioGRIDLOC643454
STRING (EMBL)LOC643454
ZODIACLOC643454
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease643454
BioCentury BCIQLOC643454
ClinGenLOC643454
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643454
Clinical trialLOC643454
Miscellaneous
canSAR (ICR)LOC643454 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC643454
EVEXLOC643454
GoPubMedLOC643454
iHOPLOC643454
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:25:59 CET 2017

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