Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC643542 (uncharacterized LOC643542)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 643542
Atlas_Id 68310
Location 18q22.1  [Link to chromosome band 18q22]
Location_base_pair Starts at 65183783 and ends at 65566856 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC643542  643542  uncharacterized LOC643542
Aliases
GeneCards (Weizmann)LOC643542
Ensembl hg19 (Hinxton)ENSG00000265533 [Gene_View]  chr18:65183783-65566856 [Contig_View]  LOC643542 [Vega]
Ensembl hg38 (Hinxton)ENSG00000265533 [Gene_View]  chr18:65183783-65566856 [Contig_View]  LOC643542 [Vega]
ICGC DataPortalENSG00000265533
TCGA cBioPortalLOC643542
AceView (NCBI)LOC643542
Genatlas (Paris)LOC643542
WikiGenes643542
SOURCE (Princeton)LOC643542
Genetics Home Reference (NIH)LOC643542
Genomic and cartography
GoldenPath hg19 (UCSC)LOC643542  -     chr18:65183783-65566856 +  18q22.1   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC643542  -     18q22.1   [Description]    (hg38-Dec_2013)
EnsemblLOC643542 - 18q22.1 [CytoView hg19]  LOC643542 - 18q22.1 [CytoView hg38]
Mapping of homologs : NCBILOC643542 [Mapview hg19]  LOC643542 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC053410 HG510111
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000018 NC_018929 NT_010966 NW_004929411
Consensus coding sequences : CCDS (NCBI)LOC643542
Cluster EST : UnigeneHs.652901 [ NCBI ]
CGAP (NCI)Hs.652901
Alternative Splicing GalleryENSG00000265533
Gene ExpressionLOC643542 [ NCBI-GEO ]   LOC643542 [ EBI - ARRAY_EXPRESS ]   LOC643542 [ SEEK ]   LOC643542 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC643542 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643542
GTEX Portal (Tissue expression)LOC643542
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC643542
DMDM Disease mutations643542
Blocks (Seattle)LOC643542
Human Protein AtlasENSG00000265533
Protein Interaction databases
FunCoupENSG00000265533
BioGRIDLOC643542
STRING (EMBL)LOC643542
ZODIACLOC643542
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease643542
BioCentury BCIQLOC643542
ClinGenLOC643542
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643542
Clinical trialLOC643542
Miscellaneous
canSAR (ICR)LOC643542 (select the gene name)
Probes
Litterature
PubMed4 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC643542
EVEXLOC643542
GoPubMedLOC643542
iHOPLOC643542
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:25:59 CET 2017

Home   Genes   Leukemias   Solid Tumours   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.