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LOC643733 (caspase 4, apoptosis-related cysteine peptidase pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 643733
Atlas_Id 68316
Location 11q22.3  [Link to chromosome band 11q22]
Location_base_pair Starts at 104772276 and ends at 104788902 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC643733  643733  caspase 4, apoptosis-related cysteine peptidase pseudogene
Aliases
GeneCards (Weizmann)LOC643733
Ensembl hg19 (Hinxton)ENSG00000235505 [Gene_View]  chr11:104772276-104788902 [Contig_View]  LOC643733 [Vega]
Ensembl hg38 (Hinxton)ENSG00000235505 [Gene_View]  chr11:104772276-104788902 [Contig_View]  LOC643733 [Vega]
ICGC DataPortalENSG00000235505
TCGA cBioPortalLOC643733
AceView (NCBI)LOC643733
Genatlas (Paris)LOC643733
WikiGenes643733
SOURCE (Princeton)LOC643733
Genetics Home Reference (NIH)LOC643733
Genomic and cartography
GoldenPath hg19 (UCSC)LOC643733  -     chr11:104772276-104788902 -  11q22.3   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC643733  -     11q22.3   [Description]    (hg38-Dec_2013)
EnsemblLOC643733 - 11q22.3 [CytoView hg19]  LOC643733 - 11q22.3 [CytoView hg38]
Mapping of homologs : NCBILOC643733 [Mapview hg19]  LOC643733 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AL833655 BC032472 BC122531
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000011 NC_018922 NT_033899 NW_004929381
Consensus coding sequences : CCDS (NCBI)LOC643733
Cluster EST : UnigeneHs.713751 [ NCBI ]
CGAP (NCI)Hs.713751
Alternative Splicing GalleryENSG00000235505
Gene ExpressionLOC643733 [ NCBI-GEO ]   LOC643733 [ EBI - ARRAY_EXPRESS ]   LOC643733 [ SEEK ]   LOC643733 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC643733 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)643733
GTEX Portal (Tissue expression)LOC643733
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC643733
DMDM Disease mutations643733
Blocks (Seattle)LOC643733
Human Protein AtlasENSG00000235505
IPIIPI00886778   
Protein Interaction databases
FunCoupENSG00000235505
BioGRIDLOC643733
STRING (EMBL)LOC643733
ZODIACLOC643733
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease643733
BioCentury BCIQLOC643733
ClinGenLOC643733
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD643733
Clinical trialLOC643733
Miscellaneous
canSAR (ICR)LOC643733 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC643733
EVEXLOC643733
GoPubMedLOC643733
iHOPLOC643733
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:26:00 CET 2017

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