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LOC644145 (exocyst complex component 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 644145
Atlas_Id 68324
Location 4q12  [Link to chromosome band 4q12]
Location_base_pair Starts at 55820071 and ends at 55837264 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC644145  644145  exocyst complex component 1 pseudogene
Aliases
GeneCards (Weizmann)LOC644145
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr4:55820071-55837264 [Contig_View]  LOC644145 [Vega]
TCGA cBioPortalLOC644145
AceView (NCBI)LOC644145
Genatlas (Paris)LOC644145
WikiGenes644145
SOURCE (Princeton)LOC644145
Genetics Home Reference (NIH)LOC644145
Genomic and cartography
GoldenPath hg38 (UCSC)LOC644145  -     chr4:55820071-55837264 +  4q12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC644145  -     4q12   [Description]    (hg19-Feb_2009)
EnsemblLOC644145 - 4q12 [CytoView hg19]  LOC644145 - 4q12 [CytoView hg38]
Mapping of homologs : NCBILOC644145 [Mapview hg19]  LOC644145 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC171876 DN831484
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC644145
Cluster EST : UnigeneHs.570825 [ NCBI ]
CGAP (NCI)Hs.570825
Gene ExpressionLOC644145 [ NCBI-GEO ]   LOC644145 [ EBI - ARRAY_EXPRESS ]   LOC644145 [ SEEK ]   LOC644145 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC644145 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)644145
GTEX Portal (Tissue expression)LOC644145
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC644145
DMDM Disease mutations644145
Blocks (Seattle)LOC644145
Protein Interaction databases
BioGRIDLOC644145
STRING (EMBL)LOC644145
ZODIACLOC644145
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease644145
BioCentury BCIQLOC644145
ClinGenLOC644145
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD644145
Clinical trialLOC644145
Miscellaneous
canSAR (ICR)LOC644145 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC644145
EVEXLOC644145
GoPubMedLOC644145
iHOPLOC644145
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:10:37 CET 2017

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