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LOC645188 (uncharacterized LOC645188)

Identity

Other aliasSPANX-L
HGNC (Hugo) -
LocusID (NCBI) 645188
Atlas_Id 68345
Location Xq27.2  [Link to chromosome band Xq27]
Location_base_pair Starts at 141625864 and ends at 141626731 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC645188  645188  uncharacterized LOC645188
AliasesSPANX-L
GeneCards (Weizmann)LOC645188
Ensembl hg19 (Hinxton)ENSG00000223438 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000223438 [Gene_View]  chrX:141625864-141626731 [Contig_View]  LOC645188 [Vega]
ICGC DataPortalENSG00000223438
TCGA cBioPortalLOC645188
AceView (NCBI)LOC645188
Genatlas (Paris)LOC645188
WikiGenes645188
SOURCE (Princeton)LOC645188
Genetics Home Reference (NIH)LOC645188
Genomic and cartography
GoldenPath hg38 (UCSC)LOC645188  -     chrX:141625864-141626731 +  Xq27.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC645188  -     Xq27.2   [Description]    (hg19-Feb_2009)
EnsemblLOC645188 - Xq27.2 [CytoView hg19]  LOC645188 - Xq27.2 [CytoView hg38]
Mapping of homologs : NCBILOC645188 [Mapview hg19]  LOC645188 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BC042039 BG773166
RefSeq transcript (Entrez)NM_001318917
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC645188
Cluster EST : UnigeneHs.679802 [ NCBI ]
CGAP (NCI)Hs.679802
Alternative Splicing GalleryENSG00000223438
Gene ExpressionLOC645188 [ NCBI-GEO ]   LOC645188 [ EBI - ARRAY_EXPRESS ]   LOC645188 [ SEEK ]   LOC645188 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC645188 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)645188
GTEX Portal (Tissue expression)LOC645188
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC645188
DMDM Disease mutations645188
Blocks (Seattle)LOC645188
Human Protein AtlasENSG00000223438
IPIIPI00929327   
Protein Interaction databases
FunCoupENSG00000223438
BioGRIDLOC645188
STRING (EMBL)LOC645188
ZODIACLOC645188
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease645188
BioCentury BCIQLOC645188
ClinGenLOC645188
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645188
Clinical trialLOC645188
Miscellaneous
canSAR (ICR)LOC645188 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC645188
EVEXLOC645188
GoPubMedLOC645188
iHOPLOC645188
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Wed May 31 15:23:44 CEST 2017

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