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LOC645354 (PRAME family member 1 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 645354
Atlas_Id 68349
Location 1p36.21  [Link to chromosome band 1p36]
Location_base_pair Starts at 13194518 and ends at 13199727 bp from pter ( according to hg19-Feb_2009)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC645354  645354  PRAME family member 1 pseudogene
Aliases
GeneCards (Weizmann)LOC645354
Ensembl hg19 (Hinxton) [Gene_View]  chr1:13194518-13199727 [Contig_View]  LOC645354 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr1:13194518-13199727 [Contig_View]  LOC645354 [Vega]
TCGA cBioPortalLOC645354
AceView (NCBI)LOC645354
Genatlas (Paris)LOC645354
WikiGenes645354
SOURCE (Princeton)LOC645354
Genetics Home Reference (NIH)LOC645354
Genomic and cartography
GoldenPath hg19 (UCSC)LOC645354  -     chr1:13194518-13199727 +  1p36.21   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC645354  -     1p36.21   [Description]    (hg38-Dec_2013)
EnsemblLOC645354 - 1p36.21 [CytoView hg19]  LOC645354 - 1p36.21 [CytoView hg38]
Mapping of homologs : NCBILOC645354 [Mapview hg19]  LOC645354 [Mapview hg38]
Gene and transcription
Genbank (Entrez)DR731272
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000001 NC_018912 NG_022770 NT_032977 NT_187517 NW_004929289
Consensus coding sequences : CCDS (NCBI)LOC645354
Gene ExpressionLOC645354 [ NCBI-GEO ]   LOC645354 [ EBI - ARRAY_EXPRESS ]   LOC645354 [ SEEK ]   LOC645354 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC645354 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)645354
GTEX Portal (Tissue expression)LOC645354
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC645354
DMDM Disease mutations645354
Blocks (Seattle)LOC645354
Protein Interaction databases
BioGRIDLOC645354
STRING (EMBL)LOC645354
ZODIACLOC645354
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease645354
BioCentury BCIQLOC645354
ClinGenLOC645354
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645354
Clinical trialLOC645354
Miscellaneous
canSAR (ICR)LOC645354 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC645354
EVEXLOC645354
GoPubMedLOC645354
iHOPLOC645354
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:26:07 CET 2017

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