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LOC645513 (septin 7 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 645513
Atlas_Id 68354
Location 4q26  [Link to chromosome band 4q26]
Location_base_pair Starts at 119454783 and ends at 119499592 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC645513  645513  septin 7 pseudogene
Aliases
GeneCards (Weizmann)LOC645513
Ensembl hg19 (Hinxton)ENSG00000245958 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000245958 [Gene_View]  chr4:119454783-119499592 [Contig_View]  LOC645513 [Vega]
ICGC DataPortalENSG00000245958
TCGA cBioPortalLOC645513
AceView (NCBI)LOC645513
Genatlas (Paris)LOC645513
WikiGenes645513
SOURCE (Princeton)LOC645513
Genetics Home Reference (NIH)LOC645513
Genomic and cartography
GoldenPath hg38 (UCSC)LOC645513  -     chr4:119454783-119499592 +  4q26   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC645513  -     4q26   [Description]    (hg19-Feb_2009)
EnsemblLOC645513 - 4q26 [CytoView hg19]  LOC645513 - 4q26 [CytoView hg38]
Mapping of homologs : NCBILOC645513 [Mapview hg19]  LOC645513 [Mapview hg38]
Gene and transcription
Genbank (Entrez)BM544557
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC645513
Cluster EST : UnigeneHs.677546 [ NCBI ]
CGAP (NCI)Hs.677546
Alternative Splicing GalleryENSG00000245958
Gene ExpressionLOC645513 [ NCBI-GEO ]   LOC645513 [ EBI - ARRAY_EXPRESS ]   LOC645513 [ SEEK ]   LOC645513 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC645513 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)645513
GTEX Portal (Tissue expression)LOC645513
Human Protein AtlasENSG00000245958-LOC645513 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC645513
DMDM Disease mutations645513
Blocks (Seattle)LOC645513
Human Protein Atlas [tissue]ENSG00000245958-LOC645513 [tissue]
Protein Interaction databases
FunCoupENSG00000245958
BioGRIDLOC645513
STRING (EMBL)LOC645513
ZODIACLOC645513
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease645513
BioCentury BCIQLOC645513
ClinGenLOC645513
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD645513
Clinical trialLOC645513
Miscellaneous
canSAR (ICR)LOC645513 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC645513
EVEXLOC645513
GoPubMedLOC645513
iHOPLOC645513
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:57:39 CET 2017

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