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LOC646030 (leucine rich repeat containing 37B pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 646030
Atlas_Id 79674
Location 17q11.2  [Link to chromosome band 17q11]
Location_base_pair Starts at 31034748 and ends at 31059109 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC646030  646030  leucine rich repeat containing 37B pseudogene
Aliases
GeneCards (Weizmann)LOC646030
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr17:31034748-31059109 [Contig_View]  LOC646030 [Vega]
TCGA cBioPortalLOC646030
AceView (NCBI)LOC646030
Genatlas (Paris)LOC646030
WikiGenes646030
SOURCE (Princeton)LOC646030
Genetics Home Reference (NIH)LOC646030
Genomic and cartography
GoldenPath hg38 (UCSC)LOC646030  -     chr17:31034748-31059109 -  17q11.2   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC646030  -     17q11.2   [Description]    (hg19-Feb_2009)
EnsemblLOC646030 - 17q11.2 [CytoView hg19]  LOC646030 - 17q11.2 [CytoView hg38]
Mapping of homologs : NCBILOC646030 [Mapview hg19]  LOC646030 [Mapview hg38]
Gene and transcription
Genbank (Entrez)-
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC646030
Gene ExpressionLOC646030 [ NCBI-GEO ]   LOC646030 [ EBI - ARRAY_EXPRESS ]   LOC646030 [ SEEK ]   LOC646030 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC646030 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646030
GTEX Portal (Tissue expression)LOC646030
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC646030
DMDM Disease mutations646030
Blocks (Seattle)LOC646030
Protein Interaction databases
BioGRIDLOC646030
STRING (EMBL)LOC646030
ZODIACLOC646030
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease646030
BioCentury BCIQLOC646030
ClinGenLOC646030
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646030
Clinical trialLOC646030
Miscellaneous
canSAR (ICR)LOC646030 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC646030
EVEXLOC646030
GoPubMedLOC646030
iHOPLOC646030
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Nov 21 13:57:41 CET 2017

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