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LOC646034 (uncharacterized LOC646034)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 646034
Atlas_Id 68363
Location 10p11.22  [Link to chromosome band 10p11]
Location_base_pair Starts at 31892078 and ends at 31894795 bp from pter ( according to hg19-Feb_2009)
Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC646034  646034  uncharacterized LOC646034
Aliases
GeneCards (Weizmann)LOC646034
Ensembl hg19 (Hinxton) [Gene_View]  chr10:31892078-31894795 [Contig_View]  LOC646034 [Vega]
Ensembl hg38 (Hinxton) [Gene_View]  chr10:31892078-31894795 [Contig_View]  LOC646034 [Vega]
TCGA cBioPortalLOC646034
AceView (NCBI)LOC646034
Genatlas (Paris)LOC646034
WikiGenes646034
SOURCE (Princeton)LOC646034
Genetics Home Reference (NIH)LOC646034
Genomic and cartography
GoldenPath hg19 (UCSC)LOC646034  -     chr10:31892078-31894795 +  10p11.22   [Description]    (hg19-Feb_2009)
GoldenPath hg38 (UCSC)LOC646034  -     10p11.22   [Description]    (hg38-Dec_2013)
EnsemblLOC646034 - 10p11.22 [CytoView hg19]  LOC646034 - 10p11.22 [CytoView hg38]
Mapping of homologs : NCBILOC646034 [Mapview hg19]  LOC646034 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AK125175 HG502786
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)NC_000010 NC_018921 NT_008705 NW_004929370
Consensus coding sequences : CCDS (NCBI)LOC646034
Cluster EST : UnigeneHs.512237 [ NCBI ]
CGAP (NCI)Hs.512237
Gene ExpressionLOC646034 [ NCBI-GEO ]   LOC646034 [ EBI - ARRAY_EXPRESS ]   LOC646034 [ SEEK ]   LOC646034 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC646034 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
GenevisibleExpression in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)646034
GTEX Portal (Tissue expression)LOC646034
Protein : pattern, domain, 3D structure
UniProt/SwissProtP0C879   [function]  [subcellular_location]  [family_and_domains]  [pathology_and_biotech]  [ptm_processing]  [expression]  [interaction]
NextProtP0C879  [Sequence]  [Exons]  [Medical]  [Publications]
With graphics : InterProP0C879
Splice isoforms : SwissVarP0C879
PhosPhoSitePlusP0C879
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC646034
DMDM Disease mutations646034
Blocks (Seattle)LOC646034
SuperfamilyP0C879
Peptide AtlasP0C879
IPIIPI00446029   
Protein Interaction databases
DIP (DOE-UCLA)P0C879
IntAct (EBI)P0C879
BioGRIDLOC646034
STRING (EMBL)LOC646034
ZODIACLOC646034
Ontologies - Pathways
QuickGOP0C879
Ontology : AmiGO
Ontology : EGO-EBI
NDEx NetworkLOC646034
Atlas of Cancer Signalling NetworkLOC646034
Wikipedia pathwaysLOC646034
Orthology - Evolution
OrthoDB646034
Phylogenetic Trees/Animal Genes : TreeFam-
HOVERGENP0C879
HOGENOMP0C879
Homologs : HomoloGeneLOC646034
Homology/Alignments : Family Browser (UCSC)LOC646034
Gene fusions - Rearrangements
Polymorphisms : SNP and Copy number variants
NCBI Variation ViewerLOC646034 [hg38]
dbSNP Single Nucleotide Polymorphism (NCBI)LOC646034
dbVarLOC646034
ClinVarLOC646034
1000_GenomesLOC646034 
Exome Variant ServerLOC646034
ExAC (Exome Aggregation Consortium)LOC646034 (select the gene name)
Genetic variants : HAPMAP646034
Genomic Variants (DGV)LOC646034 [DGVbeta]
DECIPHER (Syndromes)10:31892078-31894795  
CONAN: Copy Number AnalysisLOC646034 
Mutations
ICGC Data Portal- 
TCGA Data Portal- 
Broad Tumor Portal-
OASIS Portal- [ Somatic mutations - Copy number]
Mutations and Diseases : HGMD-
BioMutasearch LOC646034
DgiDB (Drug Gene Interaction Database)LOC646034
DoCM (Curated mutations)LOC646034 (select the gene name)
CIViC (Clinical Interpretations of Variants in Cancer)LOC646034 (select a term)
intoGenLOC646034
Cancer3DLOC646034(select the gene name)
Impact of mutations[PolyPhen2] [SIFT Human Coding SNP] [Buck Institute : MutDB] [Mutation Assessor] [Mutanalyser]
Diseases
OMIM
Orphanet
MedgenLOC646034
Genetic Testing Registry LOC646034
NextProtP0C879 [Medical]
TSGene646034
GENETestsLOC646034
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease646034
BioCentury BCIQLOC646034
ClinGenLOC646034
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646034
Clinical trialLOC646034
Miscellaneous
canSAR (ICR)LOC646034 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC646034
EVEXLOC646034
GoPubMedLOC646034
iHOPLOC646034
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Tue Mar 14 12:26:10 CET 2017

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