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LOC646813 (DEAH-box helicase 9 pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 646813
Atlas_Id 68380
Location 11p11.12  [Link to chromosome band 11p11]
Location_base_pair Starts at 50409147 and ends at 50420631 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC646813  646813  DEAH-box helicase 9 pseudogene
Aliases
GeneCards (Weizmann)LOC646813
Ensembl hg19 (Hinxton) [Gene_View]
Ensembl hg38 (Hinxton) [Gene_View]  chr11:50409147-50420631 [Contig_View]  LOC646813 [Vega]
TCGA cBioPortalLOC646813
AceView (NCBI)LOC646813
Genatlas (Paris)LOC646813
WikiGenes646813
SOURCE (Princeton)LOC646813
Genetics Home Reference (NIH)LOC646813
Genomic and cartography
GoldenPath hg38 (UCSC)LOC646813  -     chr11:50409147-50420631 +  11p11.12   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC646813  -     11p11.12   [Description]    (hg19-Feb_2009)
EnsemblLOC646813 - 11p11.12 [CytoView hg19]  LOC646813 - 11p11.12 [CytoView hg38]
Mapping of homologs : NCBILOC646813 [Mapview hg19]  LOC646813 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AB231713 AB231714 AB231715 AB231716 AB231717
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC646813
Cluster EST : UnigeneHs.684179 [ NCBI ]
CGAP (NCI)Hs.684179
Gene ExpressionLOC646813 [ NCBI-GEO ]   LOC646813 [ EBI - ARRAY_EXPRESS ]   LOC646813 [ SEEK ]   LOC646813 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC646813 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646813
GTEX Portal (Tissue expression)LOC646813
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC646813
DMDM Disease mutations646813
Blocks (Seattle)LOC646813
IPIIPI00655616   
Protein Interaction databases
BioGRIDLOC646813
STRING (EMBL)LOC646813
ZODIACLOC646813
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease646813
BioCentury BCIQLOC646813
ClinGenLOC646813
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646813
Clinical trialLOC646813
Miscellaneous
canSAR (ICR)LOC646813 (select the gene name)
Probes
Litterature
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC646813
EVEXLOC646813
GoPubMedLOC646813
iHOPLOC646813
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Thu Nov 9 12:10:50 CET 2017

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