Atlas of Genetics and Cytogenetics in Oncology and Haematology

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LOC646938 (TBC1 domain family member 2B pseudogene)


Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 646938
Atlas_Id 68382
Location 15q25.1  [Link to chromosome band 15q25]
Location_base_pair Starts at 78752037 and ends at 78753392 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)


Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute



External links

HGNC (Hugo)-   -
Entrez_Gene (NCBI)LOC646938    TBC1 domain family member 2B pseudogene
GeneCards (Weizmann)LOC646938
Ensembl hg19 (Hinxton)ENSG00000238166 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238166 [Gene_View]  ENSG00000238166 [Sequence]  chr15:78752037-78753392 [Contig_View]  LOC646938 [Vega]
ICGC DataPortalENSG00000238166
TCGA cBioPortalLOC646938
AceView (NCBI)LOC646938
Genatlas (Paris)LOC646938
SOURCE (Princeton)LOC646938
Genetics Home Reference (NIH)LOC646938
Genomic and cartography
GoldenPath hg38 (UCSC)LOC646938  -     chr15:78752037-78753392 +  15q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC646938  -     15q25.1   [Description]    (hg19-Feb_2009)
GoldenPathLOC646938 - 15q25.1 [CytoView hg19]  LOC646938 - 15q25.1 [CytoView hg38]
Genome Data Viewer NCBILOC646938 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AA417108 BC127919 BC141940 BC150505
RefSeq transcript (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC646938
Gene ExpressionLOC646938 [ NCBI-GEO ]   LOC646938 [ EBI - ARRAY_EXPRESS ]   LOC646938 [ SEEK ]   LOC646938 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC646938 [ Firebrowse - Broad ]
GenevisibleExpression of LOC646938 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)646938
GTEX Portal (Tissue expression)LOC646938
Human Protein AtlasENSG00000238166-LOC646938 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC646938
Human Protein Atlas [tissue]ENSG00000238166-LOC646938 [tissue]
Protein Interaction databases
Ontologies - Pathways
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Oct 4 16:05:54 CEST 2021

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