Atlas of Genetics and Cytogenetics in Oncology and Haematology


Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

X Y 1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 NA

LOC646938 (TBC1 domain family member 2B pseudogene)

Identity

Other alias-
HGNC (Hugo) -
LocusID (NCBI) 646938
Atlas_Id 68382
Location 15q25.1  [Link to chromosome band 15q25]
Location_base_pair Starts at 78752037 and ends at 78753392 bp from pter ( according to hg38-Dec_2013)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 


External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC646938  646938  TBC1 domain family member 2B pseudogene
Aliases
GeneCards (Weizmann)LOC646938
Ensembl hg19 (Hinxton)ENSG00000238166 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000238166 [Gene_View]  chr15:78752037-78753392 [Contig_View]  LOC646938 [Vega]
ICGC DataPortalENSG00000238166
TCGA cBioPortalLOC646938
AceView (NCBI)LOC646938
Genatlas (Paris)LOC646938
WikiGenes646938
SOURCE (Princeton)LOC646938
Genetics Home Reference (NIH)LOC646938
Genomic and cartography
GoldenPath hg38 (UCSC)LOC646938  -     chr15:78752037-78753392 +  15q25.1   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC646938  -     15q25.1   [Description]    (hg19-Feb_2009)
EnsemblLOC646938 - 15q25.1 [CytoView hg19]  LOC646938 - 15q25.1 [CytoView hg38]
Mapping of homologs : NCBILOC646938 [Mapview hg19]  LOC646938 [Mapview hg38]
Gene and transcription
Genbank (Entrez)AA417108 BC127919 BC141940 BC150505
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC646938
Cluster EST : UnigeneHs.449783 [ NCBI ]
CGAP (NCI)Hs.449783
Alternative Splicing GalleryENSG00000238166
Gene ExpressionLOC646938 [ NCBI-GEO ]   LOC646938 [ EBI - ARRAY_EXPRESS ]   LOC646938 [ SEEK ]   LOC646938 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC646938 [ Firebrowse - Broad ]
SOURCE (Princeton)Expression in : [Datasets]   [Normal Tissue Atlas]  [carcinoma Classsification]  [NCI60]
BioGPS (Tissue expression)646938
GTEX Portal (Tissue expression)LOC646938
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC646938
DMDM Disease mutations646938
Blocks (Seattle)LOC646938
Human Protein AtlasENSG00000238166
IPIIPI00741056   
Protein Interaction databases
FunCoupENSG00000238166
BioGRIDLOC646938
STRING (EMBL)LOC646938
ZODIACLOC646938
Ontologies - Pathways
Huge Navigator - [HugePedia]
snp3D : Map Gene to Disease646938
BioCentury BCIQLOC646938
ClinGenLOC646938
Clinical trials, drugs, therapy
Chemical/Protein Interactions : CTD646938
Clinical trialLOC646938
Miscellaneous
canSAR (ICR)LOC646938 (select the gene name)
Probes
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC646938
EVEXLOC646938
GoPubMedLOC646938
iHOPLOC646938
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

Search in all EBI   NCBI

© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Mon Sep 18 13:25:55 CEST 2017

Home   Genes   Leukemias   Solid Tumors   Cancer-Prone   Deep Insight   Case Reports   Journals  Portal   Teaching   

For comments and suggestions or contributions, please contact us

jlhuret@AtlasGeneticsOncology.org.