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LOC649133 (uncharacterized LOC649133)

Identity

Alias (NCBI)-
HGNC (Hugo) -
LocusID (NCBI) 649133
Atlas_Id 68392
Location 11q23.3  [Link to chromosome band 11q23]
Location_base_pair Starts at 120249759 and ends at 120265932 bp from pter ( according to hg38-Dec_2013)
Fusion genes
(updated 2017)
Data from Atlas, Mitelman, Cosmic Fusion, Fusion Cancer, TCGA fusion databases with official HUGO symbols (see references in chromosomal bands)

Note

Non-annotated gene. Preliminary data : if you are an author
who wish to write a full paper/card on this gene, go to  How to contribute

DNA/RNA

 



External links

Nomenclature
HGNC (Hugo)-   -
Cards
Entrez_Gene (NCBI)LOC649133    uncharacterized LOC649133
Aliases
GeneCards (Weizmann)LOC649133
Ensembl hg19 (Hinxton)ENSG00000259541 [Gene_View]
Ensembl hg38 (Hinxton)ENSG00000259541 [Gene_View]  ENSG00000259541 [Sequence]  chr11:120249759-120265932 [Contig_View]  LOC649133 [Vega]
ICGC DataPortalENSG00000259541
TCGA cBioPortalLOC649133
AceView (NCBI)LOC649133
Genatlas (Paris)LOC649133
SOURCE (Princeton)LOC649133
Genetics Home Reference (NIH)LOC649133
Genomic and cartography
GoldenPath hg38 (UCSC)LOC649133  -     chr11:120249759-120265932 -  11q23.3   [Description]    (hg38-Dec_2013)
GoldenPath hg19 (UCSC)LOC649133  -     11q23.3   [Description]    (hg19-Feb_2009)
GoldenPathLOC649133 - 11q23.3 [CytoView hg19]  LOC649133 - 11q23.3 [CytoView hg38]
ImmunoBaseENSG00000259541
genome Data Viewer NCBILOC649133 [Mapview hg19]  
Gene and transcription
Genbank (Entrez)AK057239
RefSeq transcript (Entrez)
RefSeq genomic (Entrez)
Consensus coding sequences : CCDS (NCBI)LOC649133
Alternative Splicing GalleryENSG00000259541
Gene ExpressionLOC649133 [ NCBI-GEO ]   LOC649133 [ EBI - ARRAY_EXPRESS ]   LOC649133 [ SEEK ]   LOC649133 [ MEM ]
Gene Expression Viewer (FireBrowse)LOC649133 [ Firebrowse - Broad ]
GenevisibleExpression of LOC649133 in : [tissues]  [cell-lines]  [cancer]  [perturbations]  
BioGPS (Tissue expression)649133
GTEX Portal (Tissue expression)LOC649133
Human Protein AtlasENSG00000259541-LOC649133 [pathology]   [cell]   [tissue]
Protein : pattern, domain, 3D structure
Domain families : Pfam (Sanger)
Domain families : Pfam (NCBI)
Conserved Domain (NCBI)LOC649133
Blocks (Seattle)LOC649133
Human Protein Atlas [tissue]ENSG00000259541-LOC649133 [tissue]
Protein Interaction databases
BioGRIDLOC649133
STRING (EMBL)LOC649133
ZODIACLOC649133
Ontologies - Pathways
Litterature
PubMed1 Pubmed reference(s) in Entrez
GeneRIFsGene References Into Functions (Entrez)
CoreMineLOC649133
EVEXLOC649133
GoPubMedLOC649133
Genes in titleautomatic search in PubMed
REVIEW articlesautomatic search in PubMed
Last year publicationsautomatic search in PubMed

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© Atlas of Genetics and Cytogenetics in Oncology and Haematology
indexed on : Sat Dec 5 17:11:42 CET 2020

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